Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0433 ATGATTAAAATTGTGTTAGGAAAATCAACAACACATTCTTATGGTGTTGCTGGCTTTAATTTCACTGGCATAATAGGAACTATTGTAGACAAAAGTTCCCGCAATGGCAAAGAGGAGATAGTGGCTATTAAGATGGCATTGGAGGATTTCTATCAATACAGCAACCAAAGGTTTGTTCTGCAGATAAGGAACTCTCAAGGAGATCCCCTTAAGGCTTCTCTTGCAGCCAGAGATCTTGTTGATAAAAAGCAGGTGCAAGCAATTATAGGGCCACAAACATGGGAAGAGACAACTTTAGTAGATGAGGTTTGTAGCCAACGCAAGACACCAGTTCTATCCCTAGCTGATGCAGCTCCAAAGTGGTCAACTTCGAAATGGCCCTTCTTGGTGCAAATGTCACCAAGTGAAATTAAGCAAATGAAAGCAATAGCTGCTATTGTTCAGTCTTGGAAATGGCAGCGTGTTAACGTAATATATGAAGATAGCGATGCTTCATCCACACAACTTTTATCCTATCTTTATAGTGCCTTCAATGAAGAAGGTGTACTTATAAGCATGCTTTTAGCCATCCCATCTTTTATTTTCTCTTCATTGTCCCAAGAACTGGAGAAGCTTGGAGACAAGCAAAGTCGAGTCTTTATTGTTATCTCTTCCCTTCCTTTGGCTATAAACCTTTTTGAAACTGCAAATAAAATGAACATGATAGAGAAAGATTCTGTGTGGATCATAACTGATCCTTTCACGTGTCTTGTTCATTCCTTGAATGCATCTACTATATCCTCCATGCAAGGGATAATTGGAGTTGAGAACTACTTTAAAAAAACAGGGCAAAAATATTATCACTTCTACATTAAATTTCGCCAAAAGTTTAGCTCAGAGTACCCTCAGGAATTTAACAACGAGCCTGGGATATTTGCAGCTCGTGCCTATGATGCTGCATGGACTCTAGCTCTATCCATGAGCCAAACCAACATTAAAGTGGGCCAAGTTTTGCTAGATAAGATTTTGCTTAATAATTTTATTGGCTTAAGTGGAAAAATTCAGTTCACTGACCAAAAGTTACCTCCTTCACATACTTTTCAGATCATCAATGTGATAGGAAATGGTTATAAGGAAATTGGGTTCTGGTCAGATGGATTAGGTTTCTCAAATAATGTTAGCCAAAATGCTACTTACAGTTCTTCAATGAAAGAACTGGGACAAGTTTTATGGCCAGGAAGACCTTGGGATACTCCAAGAGGATGGGCCCTGCCAACAAGTGCAAAACCACTAAGAGTTGGGGTTCCTGCTTTGTCCACACTAAAACAATTTATAAATATAACCCATGATCAATCCAAAAACATTGCCTTCATACAGGGATTTACTATTGATCTTTTCAGAGAAACCATGAAGTTGCTGCCCTACCATTTTCCGTACAAACTATATGCTTTTAATGACACATACGATAATTTGGTGAAGCAAATTTATTTGAAGAATTTTGATGCAGTGATTGATGTAACAATAATTTCATACCGATATCAGTATGCTGAATTCACTCAGCCATACACTGATCCGGGTGTGGTGATGGTAGTCCCCCTTAAATCAAAAGCAGGACATAGAGCTTGGTTATTCATGAAGCCTTTTACAAAAACAATGTGGATTCTAATAGTGGTCATGATTATCTACAATGGCTTTGTTCTATGGATGTTGGAAAGACATCATTTCCCTGAACTTAATGGCTCCACGCTGACCATGGCTTGGTTGACACTAACCCCTCTCATCAACTTCAATGACACAGGGTACAAGTTGTTGGGTTGGACTCCCAACTATGTGTCCAAAAAGTCCAAATTTTCAAGCTCATTTTCTACACTTAATTGA 1857 0.3866 MIKIVLGKSTTHSYGVAGFNFTGIIGTIVDKSSRNGKEEIVAIKMALEDFYQYSNQRFVLQIRNSQGDPLKASLAARDLVDKKQVQAIIGPQTWEETTLVDEVCSQRKTPVLSLADAAPKWSTSKWPFLVQMSPSEIKQMKAIAAIVQSWKWQRVNVIYEDSDASSTQLLSYLYSAFNEEGVLISMLLAIPSFIFSSLSQELEKLGDKQSRVFIVISSLPLAINLFETANKMNMIEKDSVWIITDPFTCLVHSLNASTISSMQGIIGVENYFKKTGQKYYHFYIKFRQKFSSEYPQEFNNEPGIFAARAYDAAWTLALSMSQTNIKVGQVLLDKILLNNFIGLSGKIQFTDQKLPPSHTFQIINVIGNGYKEIGFWSDGLGFSNNVSQNATYSSSMKELGQVLWPGRPWDTPRGWALPTSAKPLRVGVPALSTLKQFINITHDQSKNIAFIQGFTIDLFRETMKLLPYHFPYKLYAFNDTYDNLVKQIYLKNFDAVIDVTIISYRYQYAEFTQPYTDPGVVMVVPLKSKAGHRAWLFMKPFTKTMWILIVVMIIYNGFVLWMLERHHFPELNGSTLTMAWLTLTPLINFNDTGYKLLGWTPNYVSKKSKFSSSFSTLN* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0433 618 CDD PBP1_GABAb_receptor_plant 25 385 IPR044440 -
Apr2g0433 618 Pfam Receptor family ligand binding region 42 367 IPR001828 -
Apr2g0433 618 Gene3D - 135 377 - -
Apr2g0433 618 Gene3D - 533 615 - -
Apr2g0433 618 SUPERFAMILY Periplasmic binding protein-like I 30 415 IPR028082 -
Apr2g0433 618 PANTHER GLUTAMATE RECEPTOR 16 591 - -
Apr2g0433 618 SUPERFAMILY Periplasmic binding protein-like II 401 552 - -
Apr2g0433 618 Gene3D - 31 357 - -
Apr2g0433 618 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 16 591 - -
Apr2g0433 618 Gene3D - 419 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0433 Apr-Chr2 5030817 5037950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0433 25 573 Ion Channels AT2G29120 31.904 2.20e-91 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0433 - - aprc:113855498 1222.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0433 2 5030817 5037950 Apr5g0145 5 1262871 1267513 ECH
Apr2g0433 2 5030817 5037950 Apr2g0433 2 5030817 5037950 ECH