Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0429 ATGAAGAAACCGAAGCAAACCCAACTGAACCCCAATTGGGTTCAACTCCAACAAAAGCTGAAGCTGAATGGCTCCAAGGCTTCAAGGACCTTCAAAAATTCAGATGAAGACACCCCAAAATCAATATTGGGGAAACGTAAAGAGAGAGCAGATGATGAATCCAATGATTGTAAGATTAATCCTCTTGTTCCTGTGAATGACGATTCAAGTCTGACAGATGCAGTGGCCATGGATTGTGAAATGGTCGGTGTTGGTCAAGGAAACAAAAGTGCCCTTGGAAGAGTAACACTGGTCAATAAGTGGGGAAATGTTATTTATGATGAGTTTGTTCGGCCAATTGAGCGGGTTGTTGACTTCCGCACTAAAATTAGTGGCATTAGACCCCGAGATCTTAGAAAAGCGAAGGATTTTTGGACTGCTCAGACGAAAGTGGCAGAGTTGATCAAAGGAAGGACCCTTGTTGGTCATGCCTTGTGCAATGATCTTAAGGCTTTATTGTTAAGTCATCCCAAAAAGGATATCCGGGATACATCCGAGTACCAACCATTTCTAAAGTCAAATGGTAAAAGAGCACTGCGGCATCTTGCTTCGGAACATCTTGGTGTTAAGATTCAATCAGGAGAACACTGCCCTATAGAAGATGCTCGTGCTGCTATGTTGCTTTACCAAAGAAGTAAAAAAGAGTGGGAGAAGAGCATAAAAGATCAATTTCGGTTCAAACAGAAGCAAAAGAAACGGAAGCAGAAAAAGAAGCAAAAGAATGATGAATATGCTTCAAATGCCAACCACACCATCATTGAATCATAG 807 0.4164 MKKPKQTQLNPNWVQLQQKLKLNGSKASRTFKNSDEDTPKSILGKRKERADDESNDCKINPLVPVNDDSSLTDAVAMDCEMVGVGQGNKSALGRVTLVNKWGNVIYDEFVRPIERVVDFRTKISGIRPRDLRKAKDFWTAQTKVAELIKGRTLVGHALCNDLKALLLSHPKKDIRDTSEYQPFLKSNGKRALRHLASEHLGVKIQSGEHCPIEDARAAMLLYQRSKKEWEKSIKDQFRFKQKQKKRKQKKKQKNDEYASNANHTIIES* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0429 268 Coils Coil 240 260 - -
Apr2g0429 268 PANTHER RNA EXONUCLEASE 4 19 252 - -
Apr2g0429 268 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 19 252 - -
Apr2g0429 268 MobiDBLite consensus disorder prediction 24 55 - -
Apr2g0429 268 Pfam Exonuclease 75 222 IPR013520 -
Apr2g0429 268 SMART exoiiiendus 73 231 IPR013520 -
Apr2g0429 268 CDD REX4_like 75 223 IPR037431 GO:0006364|GO:0008408
Apr2g0429 268 Gene3D - 70 251 IPR036397 GO:0003676
Apr2g0429 268 MobiDBLite consensus disorder prediction 236 268 - -
Apr2g0429 268 SUPERFAMILY Ribonuclease H-like 74 230 IPR012337 -
Apr2g0429 268 MobiDBLite consensus disorder prediction 30 55 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0429 52 228 C2H2 Transcription Factor Family AT2G48100 34.010 5.89e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0429 K18327 - gmx:100819122 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0429 2 4990526 4994410 Apr2g0429 2 4990526 4994410 ECH