Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0424 ATGCGATCATCGCCATCCTCGTCGGGTTCGTCGTTGGGCATTGGCCGATCGGGTTTGCGGCTTCGGAAGAAGCATAAGAGGTTGGATGCAATATGCGAGGAAGAGTACAATCGAAACCATGTTGAGTTCAATGAGGATAATGGTGATTTAGACCCTGATGCAGGGGTTCGTCGAAGCTCCCGGGTTCGCCGTGCCCCAGTATTGCTCGACGCCTCTCCTCCTCCGCCAAAGAAGCGGCGGAGGCTAGGGAAAGATGGAATTGGCCATGGTGTGGAGGGTGTCAAGAGTTTAGGGCGGGAAAATAGGGGTTCTGGCGGGACTTGGAATTCTAGGTTGAGATCAAGTGTCAGGAGTGTCGGTTTTCGAGTGAAGAAGGAGAGGCAATCACCCCGTGGGAAGAGAAAGTTGTTTGAGGATGAGGGTGTAAGTAAGGATGAGGAGGTTGATGGGAAAGATGAGTTGGAAGGTTTGAAGCCAAAAATAGTTAAGTCGAAGAGACCGGGGAGAATCAAAGCCACAAAACATGAAGAAGGGCATGAAGAGAATGTGTCTCATGGGAGTTTAGATGAGAGCAAGAGTCAGGAAGTGGAGCTCGTATTGAACAAGGGTGAGGAGTGTGTTTCTGTTCCTGGAACTGAATTGTCGGGAGGGATTGAGATAGATAATTTGGATGGAAATGACTCACCTATGATAGGGAATGAGGAGAGGATCTTATCCAACAATTTGCAAACTGGGGAGTGTGGTGGTGACATTGAACTGTCTCCTGTCAGTCCGGTGGAACATGAGGATAAACAGGATGAGCAGTTAGAGGGTTTGAAGGAAAGCAAAAATGTAGGTGATGTAGCTGAACAGGTAGATAATGAGGGTTCTCTTGGCAAGGAGGTTGATGACATTAACGAAAATGTCTTGAAAGATGCAAATGTTGAGAGAACAGACGAGTTGAAACATGCTTCGAATGACAAACGTGGCCACCAACGAATCAAAGAGGGTAGGCGGTGTGGTTTGTGCGGTGGAGGGAGTGATGGTAAGCCTCCAAAAAGGTTAGCTCAGGATAATGGGGAAAGTGAAAATGAAGCTTATAGTGGGTCATCATCTTCTGAGGAGCCTAATTATGATCTCTGGGATGGTTTTGATGATGAACCTGGTTGGCTTGGGCGTCTCTTGGGTCCTATTAATGATCACTATGGTATTGCTAGAATATGGGTTCATCTGCACTGTGCTGTATGGAGTCCAGAGGTGTATTTTGCTGACTTTGGATGCTTGAAAAATGTGCGTGCTGCACTTTTTCGAGGCAGGGCATTGAAGTGTACACGCTGTGGGAGGCGAGGGGCAACCACTGGTTGTCGTGTTGATCGTTGTCCAAAAACTTATCACTTGCCTTGTGCGAGAGCAAGTGGTTGCATCTTTGATCATCGTAAATTTCTTATAGCCTGCACAGACCATCGGCATCTCTTCCAACCTCGTGGTAATAAATATTTAGCCCGGATAAAGAAGTTAAGGGCTAGGAAAATGATGTTGGAGATAAGGAAGCGATCAAATGATGCTTGTAGAAAAGATATTGTGGAAGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCTGTGTACATTGGTGGTTCAGACTCTACCAGTGAAAGTTCATTTCAAGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGTTGTATGAAAGAAGTTGTTATTCTACCTCTGCTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCTCCAAGAGGTGTTCTTTTGCATGGGCATCCTGGAACAGGGAAAACCTTAGTGGTCCGGGCATTGATAGGTGCATGTGCTCGTGGAGATAAACGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATATGTAGGTGATGCTGAGCGTCAACTAAGGCTATTATTTCAGGTTGCTGAGAGATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGACTGGCACCCTGCCGAACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACTTTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGTTCAGTTGTGGTCATTGGTGCAACAAACCGTCCTGAAGCTGTTGACCCTGCGCTTAGGCGCCCTGGTAGATTTGATCGGGAAATTTATTTTCCATTACCATCAATTGAGGACAGAGCTTCCATACTATCACTTCACACCCAGAAGTGGCCAAAACCAATTACTGGAGCCTTGCTTGAGTGGATTGCAAGAAAAACACCTGGCTTTGCTGGTGCTGATCTCCAGGCTCTTTGTACTCAGGCGGCCATCAATGCATTGAAGAGGAATTTCCCTTTGGAAGAAGTGCTGTCTTTAGCTGAAGGAAAATATTCAGGTTGTAAGCATGTTCCTCTTCCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCTTTTTTATCTTCTCCTCCACCTTGCTCCCGGAGAGATGCTGGAAATGCTGCTAATGATGTAGTCTGCTACCCTCTTCCTAGCCAACTTATTCCTTGTTTGTTGCGGCCATTATGCGCCCTTCTTGTATCTCTTTATCTTGATGAACGTCTATGGTTACCCCTTTCCATATCTAAAGCTGTATTAATGATAAAGGATGTCATGATTTCTGCTCTAGACAAAAAGAATAAGCCTTTTGATCGTTGGTGGTTGCACATGGATGATTTTCTTCAAGAAACAAATATTGCTTATGAGGTAAAGAGAAAGCTTAGTTGTTCTGGTGTTTTATCTGTGGATGATGGCTTTGATGGTTCATATGATACTGTGGATGATGCCAATAATGACATGCTAAAGTTAGAACCCTCCATAAGGAACCATCTTGTCATGCGTAATGGTTTATTGCCAGTCATGCCATTTGCATTGACCAATAAATCAGGATTTCGGTTATTAATTTCTGGAAATCCGCGATCTGGCCAGAGACATATTGTTTCTTGCCTTCTCCACTGCTTTGTTGGGAATATTGAAATACAGAAGATTGATATGGCTACTATTTCACTAGAAGGGCACGGAGATGTGGCACAAGGGATTGCTCAACTATTAATGAAATGTGCTAGCAGGCAATCTTGCATAGTATTCATGCCAAGAATTGATTTATGGGCTGTGGAGAAACATTTCCAAATTGCTGAAAAAACTGATTCATGCTTAACGATGGACAAGTCTTGTTTCACTCCAAACAAGGTTGTTAATAAGAAAAATGAGGTCGGTACTGAGAAAAATTCATCAGTGATTACTGAAGGCCAAGCCAACACAAAGGCTTCATATGCCTGGATGTCATTCATTGAGCAGGTGGAGTCCATTGGTGTATCCACATCCTTGATGATTCTGGCGACTTCAGAAGTTCCCTGTACAGAACTTCCACACAAGATGCGAGAATTCTTCAAGAGTTATCAATATAAAGACAGCCTGTCAACTCCTTTTGAGCAGTCAGTTCCTCGATTCTCTGTGCAGATTGATGGGAATTTTGATCATGACTTGGTTATCAATCAATCAGCAGCAGAGATCTTGAGAAATGTAGTTGTGCAGCAGGTTCAATTGATTCATCAGATATCTCATGTTCATATGGGTATCCAGAAGGGCCAAAGAACCCATGAATCAATTGAAGTTTGTAAAGACACGGCATGTCAAAGGAAAGAAAATGGATCAACCAATGATAAGAAGGGTGAAATTCCACTCGAACCCTTTACAAAAGTTCCACCACCACCCAACAGTAAGTCACTGAAGGGAAAATCAACCCTGTTGTTGGCAATATCCACGTTTGGCTATCAAATTCTTCTATACCCACATTTTGCTGAACTTTGTTGGGTTACATCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGATGGCCTTTTAATTCCTGTGTAATTCGTCCTAATGATTCACAAGACAAGGTGGTAGTTTCTTGTAGCTCTGGTGGCATTAAAAGCAAAGAAAGATCTGGTTTAGTGAGAGGCTTGATTGCTGTTGGTTTATCAGCATACAGGGGGGTTTATAAATCAGTTAGGGAAGTGGCTGTTGATGTAAGGAAGGTTCTTGAGATCTTAATTGAGAAAATCAATACTAAAATTCAAGCTGGGAAAGATAGATATCAATACCTTCGTATTTTATCACAAGTGGCTTATTTAGAAGATATGGTCAACAACTGGGCTTATGCATTGCTTAGTCTGGATCAGGATTCCCCTGAGCATAAAGCCAAGGTTGTACCAGCAAGTGGTGGGTCATTAAACAGTCATCACACATGCGAAAATCACCAAACTGAAGGTGAGGGTAGCCGCTTGGTTGCTCATGTAGATGGTGATGATTTGGAGACTCTGGAGGGAAGTGGCAAAGAAATTCCTACTGAAACAACTGGATGTCTTGCCTCTAATAACAAAAATGATAATTTCGATAATCTTGATTGTGACAGTGAAAATGTTAGTTGTAAAGGGTCTCTACAAAATCATTCTTTTTCAGATAAGCATATCAACAGCTCTGTTGCTGCAAACCGACCTCTTAATCCATCCATAAATCAGGAGAATGGGACATTATGTGGACAATCTGAACCTGTAACTTCTGGAAATGTAGTGACTGAAGAACTTGGGATGTCAAAAGAATTCAACGAATCCTCATGCACACACACACTGGTTCTTTCTGAAAATGGACTTCACCCTGCCAGCGAACCACAGAATGTCGAGGCTGGTAACATGAGTACAGTCTCTGATCAGCCTCATAGCTTGTCCACAGAGGAGACTGGCATTAAGTCAAGTGAAGCTAAATCTGGTGAACGTGAGAATGCCATAGACAGTGGTGTCTCTTCAAGTAAGGGCAGTGGTCCTGTTAAATCTGAGGTCATCTGCTTGTATCAATGTTGCCCTTCATGTCTCTGCAGTCTCTATCATTTGACAAAGAAAATACTCGTTCGCGAGTTGGGGTTGGATAGCGGTCAAAAGACAGTAGAAGATGTCCATGATGTCGTTGCATCATTATCTGTGGATATTATTTCAGCAGTTAGAAAATGTTTTATGGCTGAAGATCTCATTGTTATTTCAAATGAAACCTCGAGACATGAAAAGCATGGAACGTCTCTTGACTGTTTGAACCTGAATACATGTCCTCCTGGGAACCCAGGCAAAAAAGTGGTGGTGCCAGCTGACTGTGTTTCTCACTCAGCAAGCCAACATGCAACTGCAATCAAAGATATGGTATTGAATGAAACACCTAAGCTTGATCTAAAATTTGTTTTCAAAGATGGTGTACTATTTCATATTGACCCAGAAAAGGATCTGCCTCGTCACTGTAAATTTGAGAACTTGTGCCTTTGTTCTCTAAGAGAGTTGATAGTAATGACAAAACGCCCTTTTGATTAG 5460 0.4295 MRSSPSSSGSSLGIGRSGLRLRKKHKRLDAICEEEYNRNHVEFNEDNGDLDPDAGVRRSSRVRRAPVLLDASPPPPKKRRRLGKDGIGHGVEGVKSLGRENRGSGGTWNSRLRSSVRSVGFRVKKERQSPRGKRKLFEDEGVSKDEEVDGKDELEGLKPKIVKSKRPGRIKATKHEEGHEENVSHGSLDESKSQEVELVLNKGEECVSVPGTELSGGIEIDNLDGNDSPMIGNEERILSNNLQTGECGGDIELSPVSPVEHEDKQDEQLEGLKESKNVGDVAEQVDNEGSLGKEVDDINENVLKDANVERTDELKHASNDKRGHQRIKEGRRCGLCGGGSDGKPPKRLAQDNGESENEAYSGSSSSEEPNYDLWDGFDDEPGWLGRLLGPINDHYGIARIWVHLHCAVWSPEVYFADFGCLKNVRAALFRGRALKCTRCGRRGATTGCRVDRCPKTYHLPCARASGCIFDHRKFLIACTDHRHLFQPRGNKYLARIKKLRARKMMLEIRKRSNDACRKDIVEEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSTSESSFQGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQKWPKPITGALLEWIARKTPGFAGADLQALCTQAAINALKRNFPLEEVLSLAEGKYSGCKHVPLPSFAVEERDWLEAFLSSPPPCSRRDAGNAANDVVCYPLPSQLIPCLLRPLCALLVSLYLDERLWLPLSISKAVLMIKDVMISALDKKNKPFDRWWLHMDDFLQETNIAYEVKRKLSCSGVLSVDDGFDGSYDTVDDANNDMLKLEPSIRNHLVMRNGLLPVMPFALTNKSGFRLLISGNPRSGQRHIVSCLLHCFVGNIEIQKIDMATISLEGHGDVAQGIAQLLMKCASRQSCIVFMPRIDLWAVEKHFQIAEKTDSCLTMDKSCFTPNKVVNKKNEVGTEKNSSVITEGQANTKASYAWMSFIEQVESIGVSTSLMILATSEVPCTELPHKMREFFKSYQYKDSLSTPFEQSVPRFSVQIDGNFDHDLVINQSAAEILRNVVVQQVQLIHQISHVHMGIQKGQRTHESIEVCKDTACQRKENGSTNDKKGEIPLEPFTKVPPPPNSKSLKGKSTLLLAISTFGYQILLYPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCVIRPNDSQDKVVVSCSSGGIKSKERSGLVRGLIAVGLSAYRGVYKSVREVAVDVRKVLEILIEKINTKIQAGKDRYQYLRILSQVAYLEDMVNNWAYALLSLDQDSPEHKAKVVPASGGSLNSHHTCENHQTEGEGSRLVAHVDGDDLETLEGSGKEIPTETTGCLASNNKNDNFDNLDCDSENVSCKGSLQNHSFSDKHINSSVAANRPLNPSINQENGTLCGQSEPVTSGNVVTEELGMSKEFNESSCTHTLVLSENGLHPASEPQNVEAGNMSTVSDQPHSLSTEETGIKSSEAKSGERENAIDSGVSSSKGSGPVKSEVICLYQCCPSCLCSLYHLTKKILVRELGLDSGQKTVEDVHDVVASLSVDIISAVRKCFMAEDLIVISNETSRHEKHGTSLDCLNLNTCPPGNPGKKVVVPADCVSHSASQHATAIKDMVLNETPKLDLKFVFKDGVLFHIDPEKDLPRHCKFENLCLCSLRELIVMTKRPFD* 1820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0424 1819 MobiDBLite consensus disorder prediction 1243 1257 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 1585 1641 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 170 195 - -
Apr2g0424 1819 Gene3D - 569 743 IPR027417 -
Apr2g0424 1819 Pfam AAA+ lid domain 769 801 IPR041569 -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 42 195 - -
Apr2g0424 1819 ProSitePatterns AAA-protein family signature. 713 731 IPR003960 GO:0005524|GO:0016887
Apr2g0424 1819 SMART AAA_5 604 745 IPR003593 -
Apr2g0424 1819 Pfam PHD-like zinc-binding domain 403 482 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 210 304 - -
Apr2g0424 1819 PANTHER AAA DOMAIN-CONTAINING 53 1815 IPR045199 -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 256 304 - -
Apr2g0424 1819 Pfam ATPase family associated with various cellular activities (AAA) 608 743 IPR003959 GO:0005524|GO:0016887
Apr2g0424 1819 MobiDBLite consensus disorder prediction 74 88 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 1243 1269 - -
Apr2g0424 1819 Gene3D - 744 802 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 330 371 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 42 64 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 1435 1461 - -
Apr2g0424 1819 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 53 1815 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 119 162 - -
Apr2g0424 1819 ProSiteProfiles Extended PHD (ePHD) domain profile. 362 482 IPR034732 -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 354 370 - -
Apr2g0424 1819 CDD AAA 602 743 - -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 102 116 - -
Apr2g0424 1819 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 378 484 IPR013083 -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 1585 1618 - -
Apr2g0424 1819 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 801 IPR027417 -
Apr2g0424 1819 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0424 Apr-Chr2 4956415 4965343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0424 570 805 Calmodulin-binding Proteins AT3G56690 41.176 2.69e-45 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0424 - - gmx:100803849 2831.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0424 2 4956415 4965343 Apr2g0424 2 4956415 4965343 ECH