Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0414 ATGGCTGATGTGGCAGGTCTAGTTGAGGCAGCAGGATCAAGATTCAGTTCAGTGGAGCTTATTGGGCAGGGATCATTTGGAGATGTCTACAAAGCGTTTGACAGGGAGCTCAACAAAGAAGTCGCCATCAAAGTTATTGATTTAGAAGAATCAGAGGATGAGATTGACGATATTCAGAAGGAAATTGCTGTTCTCTCACAATGTCGATGTCCATACATTACTGAGTATTATGGTTCCTATCTGAATCACACTAAACTTTGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCCCTTGATGAAATGTCCATTGCTTGCATTCTACGTGACTTGCTGCATGCTATTGATTATCTACATAGTGAAGGAAAAATTCATAGAGATATTAAAGCCGCAAACATTTTATTGTCTGAAAATGGTGATGTGAAGGTTGCAGATTTTGGTGTTTCTGCACAATTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCTGAGGTTATTCAGCAGAATGCAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACTGCAATTGAAATGGCAAAGGGGGAGCCTCCTCTTGCTGATCTTCACCCCATGAGAGTGCTTTTCATCATACCCCGGGAGAATCCTCCACAGCTAGATGACCATTTTTCTCGTCCAATGAAAGAATTTGTTTCATTGTGTTTAAAGAAGGTTCCTGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATTCGGAATGCTAAGAAGAGTCTGAAGCTTTCAGAAAGAATAAGAAGGGAGCGTCCAAAGTACCAAATAAAAGAAGATCCAGGGACCCCTAGAAATGGCCCAAGAGGGATGGGGGAGGGATCAGATACTGTAAAGGTGACAAGAGATTTAAGAGGTGAAGAAACTACTCGACCCAGTGGTCAGGGTATAACCCTGAAAAGTGCTGGATGGGACTTCAGCATTGGTGCATCACAGGGTACTGGAACCTTTCGTAGTGCTTCTCGACCACCTCAGTTTAGAGATAAGAAAACTGAAGTTTCACATAATCAACTTAGCCAAAGAAAAGCTCCAGAGAGTGGCTATCAAGGGGGGTCTGCCAATAGGAGTGCACTTAATGAGCCACTTGAAACTTCTTCTGGAAAAGATCTTAGAGTTCCCCACCGTGATGAGCATTTGGATAATGACCTTGAAGATGATGAATTGTCTGGGAATGGATCGGGAACTGTTGTTGTTCGATCTCCAAAAGGATCAAGGCCATCAATGTTTCGTGACCAGAACTCTCAGTCTGACAGCAGCTATGCTTCCTTTGAAGATGCTTCTACCAGTGGAACTGTTGTTTTTCGTAGTCGGCATGATAATTCTGATTCTTCACAGACACCAAGGTCTCGACAGGGACTTCATGACAGAAATTCAAATGCCTCACTGGAAGATAGTGCATCAAATCTTGCTGAGGCAAAGGCTGCAATCCAAAGAGGGCAAAAGAAAGTGAATGCTCGAGAGAGACATGCCCCAGGTAAAGTCAACAATGATATACGGGAAAGCAAGAGAGACCAATCGACTGGCAGTTCTGATTCTTCAAGAGCACTTCGTGAATATGATGCACAAAAGGGCATGTTAAGATCACATTACGCTAGTAACAATGCAGAACGTGCTAAAATAATGTCATCATCAGTGCCATTATCAGTTTTGCTTATTCCTTCATTAAAAGAGGTTATTGCTGATGATCCAGAAGGGTCAATCGTGGGGGCAGTTATCAATTCTTTCATAAACATGGAGGGTGCAAAGCCTAAATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCATTTGGCAAGTTCAAAGGAAGATTCATTGAAGGACCTGCAGGGCTTTGCATGCCAACTATTCAGCAAGACCAAGTCAGCTGAAGAAACCCGAAATGCTGAGGCCGATAACCGGAAGAGACAACAAAACAAGGAACATCATTCAAATAGCAATTTAAGCCCACTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCAAGGGATCTAAACCCATCTTGA 2109 0.4296 MADVAGLVEAAGSRFSSVELIGQGSFGDVYKAFDRELNKEVAIKVIDLEESEDEIDDIQKEIAVLSQCRCPYITEYYGSYLNHTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQQNADGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDDHFSRPMKEFVSLCLKKVPAERPSAKELLKDRFIRNAKKSLKLSERIRRERPKYQIKEDPGTPRNGPRGMGEGSDTVKVTRDLRGEETTRPSGQGITLKSAGWDFSIGASQGTGTFRSASRPPQFRDKKTEVSHNQLSQRKAPESGYQGGSANRSALNEPLETSSGKDLRVPHRDEHLDNDLEDDELSGNGSGTVVVRSPKGSRPSMFRDQNSQSDSSYASFEDASTSGTVVFRSRHDNSDSSQTPRSRQGLHDRNSNASLEDSASNLAEAKAAIQRGQKKVNARERHAPGKVNNDIRESKRDQSTGSSDSSRALREYDAQKGMLRSHYASNNAERAKIMSSSVPLSVLLIPSLKEVIADDPEGSIVGAVINSFINMEGAKPKSCDVLVKKLLQHLASSKEDSLKDLQGFACQLFSKTKSAEETRNAEADNRKRQQNKEHHSNSNLSPLARFLLSRWQGQTSRDLNPS* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0414 702 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 700 - -
Apr2g0414 702 SUPERFAMILY Protein kinase-like (PK-like) 12 269 IPR011009 -
Apr2g0414 702 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Apr2g0414 702 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0414 702 Gene3D Transferase(Phosphotransferase) domain 1 12 297 - -
Apr2g0414 702 MobiDBLite consensus disorder prediction 400 414 - -
Apr2g0414 702 Coils Coil 495 515 - -
Apr2g0414 702 MobiDBLite consensus disorder prediction 370 396 - -
Apr2g0414 702 Coils Coil 653 673 - -
Apr2g0414 702 MobiDBLite consensus disorder prediction 346 549 - -
Apr2g0414 702 Pfam Protein kinase domain 16 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0414 702 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 700 - -
Apr2g0414 702 MobiDBLite consensus disorder prediction 426 499 - -
Apr2g0414 702 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0414 702 MobiDBLite consensus disorder prediction 513 540 - -
Apr2g0414 702 MobiDBLite consensus disorder prediction 278 292 - -
Apr2g0414 702 MobiDBLite consensus disorder prediction 278 312 - -
Apr2g0414 702 CDD STKc_MST3_like 13 283 - -
Apr2g0414 702 MobiDBLite consensus disorder prediction 655 674 - -
Apr2g0414 702 Coils Coil 41 68 - -
Apr2g0414 702 MobiDBLite consensus disorder prediction 655 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0414 Apr-Chr2 4875062 4887356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0414 1 699 MAP Kinase Kinase Kinase Kinase AT3G15220 63.533 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Apr2g0414 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0414 K08838 - gmx:100815042 1160.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0414 2 4875062 4887356 Apr2g0414 2 4875062 4887356 ECH