Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0413 ATGGTGGGCTCAGGAGGAGGAGATAGGAGGAAAGAAGCAGTGGGAATGATGGCCCTTCATGAGGCCCTCAGAACCCTCTGTCTCAACTCTGAGTGGACTTACTCTGTTTTCTGGACAATTCGTCCTCGCCCGAGACTCAGAGGAGGTAATGCCTGCAAGCTTGCAGTTGGAGATGATAACGGTTCCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGACTCAGTGGAAGATGGAGAGGATCCTGTCAGAAAAGCTTTCAGCAAAATGTCTATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCCAATATCTCCAACTACTGGCAGAGCTCTTTTGATGCTCTTCCTCCTGAATGGACAGACCAGTTTGAGTCAGGTATTCAGACCATAGCTGTGATTCAAGCTGGACATGGTCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTAAGAATGAGACACACTTTTGAATCCCTGGGATACCAATCTGGTTTCTACCTCTCACAACTATTCTCTTCAACAAGGAACACTTCCTCTTCTACTTCCGTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCTCCTCCACTCTTCAACTGGGGTCAAAGGTCACTCACTTCTTCTACTTCCATGCTATCCTCGCCCAATTTTCAACAACATGCAGCTAGGCATGGTTTTCCACAAGCCAAAGATGAGACACACATGTTTCTAATGCCTCATGCATCATCAGAAACAGCAAGAATTGAAGACATGGTGGGGGAACATGAAAATGACATAAAGTGGCCTAATGGGTTGTCTTTCTTCAATGCACTCACTGGAAGAACAGAAGATGCTAATAAGCTTTTGTTCAATCCAGAGAGCAAACATGGTGATCAGAATCAACACCGCCCTCTTACTCAAAATCCCAATTCAGATGCCTCCAACATGCAAAATGTTAGTGGAACCAACCCAAATGAGTTCTTGAGCTTGGATAGCCACCAAGAAGATGCAAGGAAAGTGGACAAGTTTAAGAGGAGCTTCACTCTACCTGCAAGAGTGGCTTCATCTTCTTCATCCACTTCAATGGATCACCATCAACAACAAGGTGTGGAGTATAGGAATTCCGAAGGAGGTATGTACCCGGATGTCATGGAAACCTTTTTGGAGTGA 1239 0.4512 MVGSGGGDRRKEAVGMMALHEALRTLCLNSEWTYSVFWTIRPRPRLRGGNACKLAVGDDNGSLMLMWEDGFCRGRDSVEDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTIPIRPPPPLFNWGQRSLTSSTSMLSSPNFQQHAARHGFPQAKDETHMFLMPHASSETARIEDMVGEHENDIKWPNGLSFFNALTGRTEDANKLLFNPESKHGDQNQHRPLTQNPNSDASNMQNVSGTNPNEFLSLDSHQEDARKVDKFKRSFTLPARVASSSSSTSMDHHQQQGVEYRNSEGGMYPDVMETFLE* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0413 412 PANTHER GB|AAF34833.1 1 412 IPR044170 -
Apr2g0413 412 MobiDBLite consensus disorder prediction 205 226 - -
Apr2g0413 412 MobiDBLite consensus disorder prediction 313 347 - -
Apr2g0413 412 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 84 185 IPR025610 -
Apr2g0413 412 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 79 IPR025610 -
Apr2g0413 412 PANTHER GB|AAF34833.1 1 412 - -
Apr2g0413 412 MobiDBLite consensus disorder prediction 324 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0413 Apr-Chr2 4854272 4856526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0413 20 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.500 1.52e-20 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0413 - - gmx:100814723 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0413 2 4854272 4856526 Apr2g0413 2 4854272 4856526 ECH