Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0408 ATGGAACTTAAGATACGTAGTTGCCTCTTGTTTCTCTTTGGTCTTATATCGGGTTCCCAAGCCTACACATTCTACGTTGGGGGAAATGATGGGTGGGTTTTGAACCCTTCTGAGAATTATAATCACTGGGCTGAAAGGAACAGGTTCCAAGTCAGTGACACTCTTGTTTTTAAGTATAACAAGGGAACAGACACGGTGTTGGAGGTGAGCAAGGAGGATTATGAGAAATGTAACAAGAAGAACCCGATCAAGAAGTGGGAGGATGGTGATTCGGTGTTCCAGTTTGATCGATCGGGTCCTTTTTACTTCATCAGTGGGAAGGATGAAAATTGTGAAAAGGGTCAGAAATTGATTATTGTGGTGTTGGCTGTGAGAGAACCACCTCCTTATTCTCCAAAACCTCCAAATACTCCTCCCTATGTTCCTATTCCTCCACAAACTCCTTCCCCTCCTTATGTTCCAAAACCTCCTCATCCTCCTACTGTTCCAACTCCTCCAAAATCTCCTTATCCACCCTATGTTCCAACACCTCCCCACACTCCTTCCCCTGTTTATACTCCTCCCAGTGTTCCTTATCCTCCTAAAGCACCAGGACCGATTAATCATCCACCCTATGTTCCAACACCTCCACAAACACCTTCTCCTGGTTATACTCCCCCCAGTGTTCCTTCACCTCCAAAAGTACCATCACCAATTATTCATCCACCTTATGTTCCAATCCCTCCAAAAACACCTTCTCCTGGCTATAGTCCTCCTACGGTTCCTTCTCCTCCAAAAGCACCATCGCCAATTAATCACCCTCCCTATGTTCCAACACCTCCAAAAATTCCTTCTCCTGTTTATAGTCCCCCCAAAGTTCCCACTCCTCCTCAAACGCCTTCTCCTGTTTATACTCCTCCCAATGTTCCTTATCCTCCAAAAGCACCATCACCTATTAATCAACCACCCTATGTTCCAACCCCTCCAAAAACACCTTCTCCTGGTTACACCCCTCCCAATGTTCCTTCTACTCCAAAAGCACCATCACCATCTAATCACCCTCCATATGTTCCAACACCTCCAAAAACACCTTCTCCAAGTTATAGTCCTCCCAGCACTCCAACTCCTCCAAACTCACCATCACCTTCTAATCACCCTCCCTATGTTCCAACACCTCCCAAAACACCTTCTCCTACTTACACTCCTCCCAATGCTCCAACTTCTCCAAAAGCACCATCACCTTCTAATAATCCACCCTATGTTCCAACACCACCGCAAACACCTTCTCCTGTTTATGCTCCTCCCAATGTTCCTTCCCCAGGAAATCAACCTCCACATCTCCCAACTCCTCCAAACACTCCATCCCCTACTTCTCAGCCACCCTACATCCCAACCCCTCCAAAAACCCCTTCTCCTAGTCATACTCCTCCAAACACTAGTCCCTCCCCTATCTCGCAACCTCCCTACATTCCAACACCCCCACAAACACCTTCTCCTACTCATCAACCACCCTCTGTTCCAACAATTCCATCTCCAACTTCTCAGCCACCTTACATGCCAACGCCACCAAAAACTCCTTCTCCTACTTCCCAACCTCCTTACGTTCCAACACCTCCAAACACTCCCAATTCCCCATTCTCTCAGCCCCCATTAGCACAATCACCCCATGGAATGGCACCACTTTCACCAACATCACCGTATCCATCCACAAACCCTCCCTCACCTTCAGTTTCAACTGCACCGGCATACCCACCGTCGAACCTCACTCCTGCAACTTCTCCGGTGCCGGTCACAACATCACCGCCATCTCAGCCACCTTCAGTTTCAACTGCACCGGCATACCCTCCCTCGCTCCACACTCCGACGACTGCTCCGGTGCCGGCCACAACATCGCCGCCATACTTGTCTCCGCCCGCCATCACTCCCACCGCTTCTCCTACGGCGTCACTTCCGGCGGCATCAACTCCCTCACCGTCATCGTCGACGACGTCTCCGCGATCGTCACAAACGCCATCATCTAGTCCCGGCGCTAATGCAACGCCGTCTTCGTCAAATGAAACGGCGCCGGCCAAGCGAAACGGCGCGTCGTCTGCAACGCCGTCTGGGTTAGCGGTGTATTTGCTAACCATTTTCGTTGGTGCTGCTCTAAGTACTATTCTTGGATAG 2145 0.4965 MELKIRSCLLFLFGLISGSQAYTFYVGGNDGWVLNPSENYNHWAERNRFQVSDTLVFKYNKGTDTVLEVSKEDYEKCNKKNPIKKWEDGDSVFQFDRSGPFYFISGKDENCEKGQKLIIVVLAVREPPPYSPKPPNTPPYVPIPPQTPSPPYVPKPPHPPTVPTPPKSPYPPYVPTPPHTPSPVYTPPSVPYPPKAPGPINHPPYVPTPPQTPSPGYTPPSVPSPPKVPSPIIHPPYVPIPPKTPSPGYSPPTVPSPPKAPSPINHPPYVPTPPKIPSPVYSPPKVPTPPQTPSPVYTPPNVPYPPKAPSPINQPPYVPTPPKTPSPGYTPPNVPSTPKAPSPSNHPPYVPTPPKTPSPSYSPPSTPTPPNSPSPSNHPPYVPTPPKTPSPTYTPPNAPTSPKAPSPSNNPPYVPTPPQTPSPVYAPPNVPSPGNQPPHLPTPPNTPSPTSQPPYIPTPPKTPSPSHTPPNTSPSPISQPPYIPTPPQTPSPTHQPPSVPTIPSPTSQPPYMPTPPKTPSPTSQPPYVPTPPNTPNSPFSQPPLAQSPHGMAPLSPTSPYPSTNPPSPSVSTAPAYPPSNLTPATSPVPVTTSPPSQPPSVSTAPAYPPSLHTPTTAPVPATTSPPYLSPPAITPTASPTASLPAASTPSPSSSTTSPRSSQTPSSSPGANATPSSSNETAPAKRNGASSATPSGLAVYLLTIFVGAALSTILG* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0408 714 SUPERFAMILY Cupredoxins 21 122 IPR008972 -
Apr2g0408 714 MobiDBLite consensus disorder prediction 129 692 - -
Apr2g0408 714 Pfam Plastocyanin-like domain 32 115 IPR003245 GO:0009055
Apr2g0408 714 MobiDBLite consensus disorder prediction 554 573 - -
Apr2g0408 714 MobiDBLite consensus disorder prediction 129 542 - -
Apr2g0408 714 PANTHER BLUE COPPER PROTEIN 9 390 IPR039391 GO:0009055
Apr2g0408 714 MobiDBLite consensus disorder prediction 634 692 - -
Apr2g0408 714 CDD OsENODL1_like 22 122 IPR041846 -
Apr2g0408 714 MobiDBLite consensus disorder prediction 580 633 - -
Apr2g0408 714 PANTHER EARLY NODULIN-LIKE PROTEIN 2 9 390 - -
Apr2g0408 714 Gene3D - 20 125 IPR008972 -
Apr2g0408 714 ProSiteProfiles Phytocyanin domain profile. 22 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0408 Apr-Chr2 4781057 4783755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0408 1 168 Phytocyanin Superfamily AT5G53870 50.000 2.61e-54 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0408 - - gmx:100809181 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0408 2 4781057 4783755 Apr2g0408 2 4781057 4783755 ECH