Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0365 ATGGGAGTTCCAGAGAAAGACCCTCTTTCCCAATTGAGTTTGCCTCCTGGGTTTCGGTTTTTCCCCACCGATGAGGAGCTTCTCGTTCAGTATCTTTGCCGCAAGGTGGCTGGTCACCATTTCTCTCTGCCAATCATTGCCGAAATTGACTTGTACAAGTTCGACCCTTGGGTTCTTCCAAGCAAGGCGATTTTTGGCGAGAAAGAATGGTACTTTTTCAGCCCGAGAGACCGGAAGTACCCGAACGGGTCTCGACCCAACAGAGTTGCCGGGTCCGGGTACTGGAAAGCTACGGGAACCGACAAGATCATCACCACCGAAGGCAGAAAAGTTGGCATAAAAAAAGCCCTCGTTTTCTACATTGGTAAAGCTCCCAAAGGCACGAAAACCAATTGGATCATGCACGAGTATCGCCTCCTAGACTCTTCCCGAAAGAACGGCGGCACTAAGCTGGACGATTGGGTTCTGTGTCGGATATACAAGAAGAACTCGGGTTCCCAGAAAGCGGTGGCAAACGGTGGCGTTTCGAGCAATGAATACACTCAGTACAGCAACGGGTCGTCGACATCGTCGTCGTCTCACCTAGACGACGTTTTGGAATCGCTGCCAGAAATCGACGACCGTTGCTTCAACCTGCCACGTGTGAACTCGCTGAGGACGATGCAACAACAGCAGCAGAACCTGGGTGCAGGGGGTTTGGTGGATTGGACGAACCCTGCGGTTCTGAACACGGTTTCGGAGTACGTTACGGGTAACCAAGCGGTGCAGGAACAAACTCAGGGGATGCTGAATTACGGTGCCTGTAATGACCTTTATGTCCCTACACTCTGTCACGTGGACTCGACGGTTCCGGAAAAACCGGGAAATCCGTTGGAGGATGAGGTTCAGAGCGGCGTCAAGATCGAACGCCTCCAGAATCCCGGGTATTTTCAGAACGAGTTCACACAGGGGTTTTCAAATTCGGTGGACCCGTTTGGGTTCAGGTACCCGGTTCAGCCGGTGGGGTTCGGGTTCAGGCATTGA 1023 0.5249 MGVPEKDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDSSRKNGGTKLDDWVLCRIYKKNSGSQKAVANGGVSSNEYTQYSNGSSTSSSSHLDDVLESLPEIDDRCFNLPRVNSLRTMQQQQQNLGAGGLVDWTNPAVLNTVSEYVTGNQAVQEQTQGMLNYGACNDLYVPTLCHVDSTVPEKPGNPLEDEVQSGVKIERLQNPGYFQNEFTQGFSNSVDPFGFRYPVQPVGFGFRH* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0365 340 PANTHER NAC DOMAIN-CONTAINING PROTEIN 55 1 318 - -
Apr2g0365 340 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Apr2g0365 340 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Apr2g0365 340 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Apr2g0365 340 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Apr2g0365 340 PANTHER NAC TRANSCRIPTION FACTOR 56 1 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0365 Apr-Chr2 4373125 4375132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0365 1 328 NAC Transcription Factor Family AT4G27410 57.184 4.07e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr2g0365 NAM 4.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0365 - - gmx:732651 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0365 2 4373125 4375132 Apr2g0365 2 4373125 4375132 ECH