Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0364 ATGGAAAGCACCGACTCATCCACCGGTTCACAACAACCGAACCTGCCACCAGGGTTTCGGTTCCACCCCACCGATGAGGAACTCGTCGTTCACTACCTCAAGAAAAAAGCGGCTTCAGCTCCTCTTCCTGTAGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCGCTAAGGCCACGTTTGGGGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGATAGGAAGTATCCGAACGGAGCGAGGCCAAACAGGGCTGCCACGTCAGGGTATTGGAAGGCCACTGGGACGGATAAGCCGGTGTTAACCTCTGGTGGAACCCAAAAGGTTGGGGTGAAGAAAGCTTTGGTTTTCTATGGAGGGAAGCCCCCAAGAGGGATCAAAACCAATTGGATCATGCATGAATATAGGCTTGCTGATAACAAGCCTAACAATAGGCCTCCTGGATGTGACTTGGGCAACAAGAAAAACTCCCTAAGGCTTGATGATTGGGTGCTGTGCCGAATCTACAAGAAGAGCAACACGCATAGGTCTCCTATGGAACATGACAGGGAAGATTCAATGGATGACATGATGGGAGGGATACCCCATTCCATCAACGTGGGCCACATGAACGCGAGGTTTCATCTTTCAAAGATGTCCACAGGCTACAACGGTGCATTGTTGGAAAATGACCAGAACTTATTGGAAGGGATGGTGATAAGTAATGGAGGGATGAACACAGCTACTACTACTACTACACATGCTGCCATGTCATCTTTGGGGCCCTCCAATTCCAAGCCAGAGCTTCCTTTTGTCCCAACCATGACTCAGTCTTCAAACACTTCCAAGAGAACACTCTCATCACTGTATTGGAATGATGAGGATGTGGCAGCAGGAACCTCTTCATCCAACAAAAGGTTCAATTTGGAAAGTGGGGATAATAACCATGCAAGTGTTGTTAGGACTGAAGAAAATGGCACTGCTACTTCTATTGCAACCCTGCTTAACCAGCTCCCTCAAACCCCTTCATTGCACCAACAATCAATGCTCGGATCATTAGGTGATGGGCTACTTCGGACACAATATCAAATACCAGGAATGAACTGGTATGCTTAG 1110 0.482 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMEHDREDSMDDMMGGIPHSINVGHMNARFHLSKMSTGYNGALLENDQNLLEGMVISNGGMNTATTTTTHAAMSSLGPSNSKPELPFVPTMTQSSNTSKRTLSSLYWNDEDVAAGTSSSNKRFNLESGDNNHASVVRTEENGTATSIATLLNQLPQTPSLHQQSMLGSLGDGLLRTQYQIPGMNWYA* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0364 369 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Apr2g0364 369 MobiDBLite consensus disorder prediction 1 20 - -
Apr2g0364 369 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Apr2g0364 369 PANTHER NAC TRANSCRIPTION FACTOR 56 1 345 - -
Apr2g0364 369 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 345 - -
Apr2g0364 369 MobiDBLite consensus disorder prediction 1 17 - -
Apr2g0364 369 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Apr2g0364 369 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0364 Apr-Chr2 4352856 4355085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0364 1 369 NAC Transcription Factor Family AT3G15510 54.145 2.65e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr2g0364 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0364 - - vra:106763825 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0364 2 4352856 4355085 Apr2g0364 2 4352856 4355085 ECH