Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0352 ATGAACGGGAAAGCCAACGTTTCGAAGGAGCTCAACGCCAAGCACAAGAAGATACTGGAAGGACTTCTTAAATTACCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAGGGTCCAAGATGGGCTAGTGTAAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAAGTTTGGGGGTACATATATCAAAGGTTCGTTCTGCAACCCTGGACACTTGGCTTCCAGAGCAAGTTGCATTCATTCAATCAATGGGCAATGAGAAAGCAAATAGTTACTGGGAAGCAGAATTACCTCCAAATTACGATAGAGTTGGAATTGAGAATTTTATTCGTGCAAAGTATGACGAGAAGAGATGGGTTCCACGAGATGGGAATTCTAAAACACCTTCAGGATTGCGGGAAGAGAAAAGTCCAGCACATTGGCAGAGGCCTGTGGAGAGAAGTGGTTATGCTACTGTTTCTGAGAATGCTTTTGAAGAAAGGAAGAAAATCCAACCATCAAATGCAATTCCTGCTCCAAGAGTTAGTGTTCCTGCTCCTCCCAGAGCACCTGAACAGGTAACTCCTGTCACCAAACCTGTGCATGTTGAGAAAGTGGAACCAGTAGCACCACAACTACAAACTGAAACCTCAAAGAAGGCTACAGACACAGCTCAAAATACCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACATGTTGTCTATGGATGGCCCAACTGAAAATGGCTCAGAAGCATCTGGTACTACTGCTGAGGATAATCACTGGGCAGGTTTTCAGTCTGCTGCAGAGGTGTCAACAGCTGAGAAGACTAGTCCACTGAAAGCAGTCGATAGTACTCCACATTCTGCTTCTGGGATTGAGGATCTTTTCAAAGATTCATCTTGTGTGACAGCAAGCTTAGCTCCAGAAAAACCACAGAAAGATGTTAAAAATGATATCATGAGCCTCTTTGAGAAGGGCAATATGGTTTCTCCATTTACTATGCATCAACAGCAGCTTGCCATGCTAGCACAGCAACAGTCTCTTCTAATGGCTGCTGCAGCTAAATCTGCTGGTGGGGATCCCAGGTATCCTGCTAGCATACAACAACCTAGACCCAATGGTTCTGTCCAAAGTTGGCCAGCTACTGGCTACTCAGTTTCTGGATTAATGCCCATGGGTGGTCAGGGAGAGCTGCAGAAACTTATGCAGGCTAGCAACATGACCCCAGCACATCTGGCAGGGAGCTCTATTCAATATCCACCATCCGGTTTCTATGCTATGGGGCAAGTTGCTTCAGTTAATGGGATGATGACAACGGGAGTGAGTAAACCTCAGTCAGCAGCTCCAGTGACATCAACCACTTCACAGTCTGCAAAGGATTATGATTTTTCCTCCTTAACGCAAGGGATGTTTACGAAACACTGA 1422 0.4508 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRAKYDEKRWVPRDGNSKTPSGLREEKSPAHWQRPVERSGYATVSENAFEERKKIQPSNAIPAPRVSVPAPPRAPEQVTPVTKPVHVEKVEPVAPQLQTETSKKATDTAQNTPPKVDYATDLFNMLSMDGPTENGSEASGTTAEDNHWAGFQSAAEVSTAEKTSPLKAVDSTPHSASGIEDLFKDSSCVTASLAPEKPQKDVKNDIMSLFEKGNMVSPFTMHQQQLAMLAQQQSLLMAAAAKSAGGDPRYPASIQQPRPNGSVQSWPATGYSVSGLMPMGGQGELQKLMQASNMTPAHLAGSSIQYPPSGFYAMGQVASVNGMMTTGVSKPQSAAPVTSTTSQSAKDYDFSSLTQGMFTKH* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0352 473 CDD ArfGap 19 117 - -
Apr2g0352 473 MobiDBLite consensus disorder prediction 124 145 - -
Apr2g0352 473 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Apr2g0352 473 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Apr2g0352 473 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Apr2g0352 473 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Apr2g0352 473 PANTHER ARF GTPASE ACTIVATOR 1 472 - -
Apr2g0352 473 MobiDBLite consensus disorder prediction 163 191 - -
Apr2g0352 473 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 472 IPR044520 GO:0005096
Apr2g0352 473 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Apr2g0352 473 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Apr2g0352 473 MobiDBLite consensus disorder prediction 176 190 - -
Apr2g0352 473 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Apr2g0352 473 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0352 Apr-Chr2 4209183 4215298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0352 16 123 C2H2 Transcription Factor Family AT4G05330 48.276 2.19e-29 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0352 K12486 - gmx:100789910 785.023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0352 2 4209183 4215298 Apr2g0352 2 4209183 4215298 ECH