Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0349 ATGATGTTATCAGCTTCGCCATCTACTCTAGCGAGGAGTTCGCTGGAAGAGATGCTTGATTCGCTTCGCCGGAGAGATGAGGAGGAGAAGCCGAAGGACTTGCCGCCAGCATTGCCGGCGCGGCCGCCGTCGAGGGCTCGGTTACCGCCGGCGAGACGTTCGTTGCCTAATAGCTTCAAGGTTGATGGTGAAAATGGAGGGAAAGACAAGGAAAACGGACATAGAAGGAAAAGTAGTTTTGGGAACAAGAAGATTAAGATGGATGTTGAATCCCCTTACGTGGTTATGTCAGAAGAGAAAGTGAGTGAACAATCATTACCGGATACTGTTTCAATGTCAAGTGATTCTTCTGCTGTTTGTGAAGCTCCTCCTCCATCTGGGGAATTCGAGGATGATAATGTTGCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAAAGGGAAGTGGGAACTAGGAACGATACAGTCAACTTCAGAAGAGGAAGCATCTGTTTCGCTCTCAAATGGAAATATGATGAAAGTAGCCAGATCAGAGCTCCTACCAGCTAATCCTGATATTTTAGAGGGTGTGGAAGATCTAATACAACTCAGTTATTTAAATGAGCCCTCAGTTCTTCACAATCTTCAGTTTAGACATTCTCAGGATATGATTTACAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCCTTCAAAGATGTCCAGATTTATGGAAACGATTATATCTCAGCTTATAGGCAGAAAACTATTGATAGTCCTCATGTTTATGCTATGGCAGATGCAGCTTATAATGAGATGATTAGAGATGAAGTAAATCAATCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAAACAGAGACAGCAAAAATTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATAGAGAATGAAGTTCTTCAGACAAATTTTATACTAGAAGCTTTTGGAAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCATGATGGGGAAAATTTGTGGGGCAAAAATTCAAACTTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTTGCCTGTGGTGAGAGGTCGTATCACATATTTTATCAACTTTGTGCTGGATCTTCATCTGATCTTAAAGAAAGACTGAATCTTAAGGTGGCCAGCGAATATAAATATCTCAATCAGAGTGATTGCATGACAATTGATGGTGTTGATGATGCTAAAAAGTTTCAAAGGCTGATGAAAGCATTGGATGTTATTCGAATGAGCAAAGAAGATCAAGAGCTAGTCTTTAAGATGCTAGCTGCAATATTATGGCTGGGAAATATATCATTCCAAGTTACTGACAATGAAAATCACATTGAGGTGGTGAATGATGAAGCTGTAACATGTGCTGCTTTGCTAATGGGCTGCAGTTCCCAGGAGCTAATGGCAGCATTATCTACCCATAAAATCCAAGCTGGGAAGGATACTATTACCAAGATGTTGAACTTGCGGCAGGCAATTGATGCAAGAGATGCATTAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAACGACGCACTGGGAGATCCATAAGTATCCTGGATATTTATGGGTTTGAGTCATTCCAGAATAACAGCTTTGAACAGTTTTGTATTAACTATGCCAATGAGAGGCTTCAACAACATTTCAATAGGCATCTGTTTAAACTTGAGCAGGAGGAGTATGAATTAGATGGCATTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGAGTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTACTCTCTTTGCTGGATGAAGAATCAAATTTTCCCAGGGCCTCTGATCTAACCCTTGCCAACAAACTTAAGCAGCACCTGCACACTAATCCTTGCTTTAAAGAGGAAAGAGGCAGGGCTTTTAGTATCTGTCATTATGCAGGGGAGGTTTTGTATGATACAACTGGCTTCCTAGAAAAGAACAGAGATCCAATGCCTTCTGATTCCATTCAACTACTGTCATCATGTAGTTGTGAACTGCTGCAGTTGTTCTCCAAGATGCTTAATCAGAAGCAATCAAATACTTTGCACGGAAGTGCTCTAGACTCTCAAAAGCAGAGCGTTGGTACAAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACTTTATTCGCTGTATAAAACCAAATACTAAGCAACACCCTGGAATATATGATGAAGATCTTGTGCTACAACAGCTCAAGTGTAGTGGAGTTTTGGAGGTTGTTAGGATTTCTAGGGCTGGATATCCTACTCGAATGACACATCAGGAGTTTTCCAGAAGGTATGGGTTTCTGCTTTCTGAGGCAAATGCATCCCAGGATCCATTGAACATCTCAGTTGCTGTTTTGCAACAGTTTAACATCCCTCCCGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGATCGGGGCACTGGAAGACAGGAGAAAACAGGTTTTGCAGGGAATACTTGGGGTTCAAAAATCCTTCCGTGGTTATCAAGCTCGTCGTTATTACCATGAACTTAAGAATGGAGTGACTGCTCTACAATCATTTGTTCGTGGAGAAATTGCAAGAAGGAAATATGGTGTTATGGTGCAGTCTTCTTTGGCTATTGCTTCTGAAAAAATTAAGAAGATAGAGGCAGTCATAGTACTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGGCATGCAAGTGGCTTGAAGAAGGTTAAAAAATATCCTGAAAATGCAAAATCTAGGCAAAAGTCTCGGGTGAAGATGCCTGAAGTAAAGGATGTGTCCAATGAGCGGGTCCAGAATCTTCCTTCAGCTTTAGCAGAACTCCAAAGGCGGGTTGTCAAGGCTGAAGCTACAATAGAGCAAAAGGAAGAGGAAAATGCAGAATTGAAGGAACAGCTAAAACAATTTGAGAGGAGGTGGATTGAATATGAGAAAAAGATGAAATCGATGGAGGAGATGTGGCAAAAACAAATGGCATCTTTGCAAACGAGCCTTGCTGCTGCTAGAAAGAGCCTTGCATCTGAGAATGCCAGTGGTCAACCTGCAAGACACGATGCTGCAACACCTTTTGGCTATGATTCTGAAGATGCCACTTCCATGGGATCTCGAACGCCTGGTGCGAGCACACCTTTGAAGTATTCTAGTAGTCTTTCTGAAGCAGGAGTTGGGAGAGATGCTAATGGTTCTTTGACTTCAGTCAGCAACCTGATGAAGGAATTTGAGCAACGCAGACATGCCTTTGATGACGATGCCAGAGCTCTGGTTGAGGTTAAAACAGGTCAATCTGCTAACACGAATTCTGTTGAAGAACTCCGGAAACTCAAACATAGGTTTGAGGGGTGGAAGAAAGAATACAAGGCTAGATTAAGAGAAACAAAAGCAAGAATTCATAAATTAGGAAATTCAGAAATGGATAAAAGTCGACGAAAATGGTGGGGGAAATTGAGTTCTAGAGCATCATAG 3597 0.4162 MMLSASPSTLARSSLEEMLDSLRRRDEEEKPKDLPPALPARPPSRARLPPARRSLPNSFKVDGENGGKDKENGHRRKSSFGNKKIKMDVESPYVVMSEEKVSEQSLPDTVSMSSDSSAVCEAPPPSGEFEDDNVAYFIKKKLHVWCRQPKGKWELGTIQSTSEEEASVSLSNGNMMKVARSELLPANPDILEGVEDLIQLSYLNEPSVLHNLQFRHSQDMIYSKAGPILIALNPFKDVQIYGNDYISAYRQKTIDSPHVYAMADAAYNEMIRDEVNQSIIISGESGSGKTETAKIAMQYLAALGGGSCGIENEVLQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSMMGKICGAKIQTFLLEKSRVVQLACGERSYHIFYQLCAGSSSDLKERLNLKVASEYKYLNQSDCMTIDGVDDAKKFQRLMKALDVIRMSKEDQELVFKMLAAILWLGNISFQVTDNENHIEVVNDEAVTCAALLMGCSSQELMAALSTHKIQAGKDTITKMLNLRQAIDARDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQNNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGIDWTKVDFEDNQECLDLFEKKPLGLLSLLDEESNFPRASDLTLANKLKQHLHTNPCFKEERGRAFSICHYAGEVLYDTTGFLEKNRDPMPSDSIQLLSSCSCELLQLFSKMLNQKQSNTLHGSALDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQHPGIYDEDLVLQQLKCSGVLEVVRISRAGYPTRMTHQEFSRRYGFLLSEANASQDPLNISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDRRKQVLQGILGVQKSFRGYQARRYYHELKNGVTALQSFVRGEIARRKYGVMVQSSLAIASEKIKKIEAVIVLQSVIRGWLVRRHASGLKKVKKYPENAKSRQKSRVKMPEVKDVSNERVQNLPSALAELQRRVVKAEATIEQKEEENAELKEQLKQFERRWIEYEKKMKSMEEMWQKQMASLQTSLAAARKSLASENASGQPARHDAATPFGYDSEDATSMGSRTPGASTPLKYSSSLSEAGVGRDANGSLTSVSNLMKEFEQRRHAFDDDARALVEVKTGQSANTNSVEELRKLKHRFEGWKKEYKARLRETKARIHKLGNSEMDKSRRKWWGKLSSRAS* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0349 1198 Pfam Myosin head (motor domain) 194 848 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 Coils Coil 983 1031 - -
Apr2g0349 1198 MobiDBLite consensus disorder prediction 100 126 - -
Apr2g0349 1198 MobiDBLite consensus disorder prediction 63 83 - -
Apr2g0349 1198 Gene3D - 375 431 - -
Apr2g0349 1198 PRINTS Myosin heavy chain signature 222 241 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 PRINTS Myosin heavy chain signature 276 301 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 PRINTS Myosin heavy chain signature 319 346 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 PRINTS Myosin heavy chain signature 551 579 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 PRINTS Myosin heavy chain signature 604 632 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 ProSiteProfiles IQ motif profile. 885 914 IPR000048 GO:0005515
Apr2g0349 1198 SMART iq_5 921 943 IPR000048 GO:0005515
Apr2g0349 1198 SMART iq_5 861 883 IPR000048 GO:0005515
Apr2g0349 1198 SMART iq_5 884 906 IPR000048 GO:0005515
Apr2g0349 1198 SMART MYSc_2a 186 861 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 MobiDBLite consensus disorder prediction 102 120 - -
Apr2g0349 1198 Gene3D - 563 750 - -
Apr2g0349 1198 PANTHER MYOSIN-2 ISOFORM X1 122 1196 - -
Apr2g0349 1198 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 139 188 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 MobiDBLite consensus disorder prediction 1048 1104 - -
Apr2g0349 1198 Coils Coil 1160 1180 - -
Apr2g0349 1198 Gene3D - 866 916 - -
Apr2g0349 1198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 886 IPR027417 -
Apr2g0349 1198 MobiDBLite consensus disorder prediction 1 15 - -
Apr2g0349 1198 MobiDBLite consensus disorder prediction 1073 1104 - -
Apr2g0349 1198 PANTHER MYOSIN 122 1196 - -
Apr2g0349 1198 Gene3D Kinesin motor domain 191 793 IPR036961 -
Apr2g0349 1198 ProSiteProfiles IQ motif profile. 864 891 IPR000048 GO:0005515
Apr2g0349 1198 CDD MYSc_Myo8 206 848 IPR036022 -
Apr2g0349 1198 Gene3D Myosin VI head, motor domain, U50 subdomain 432 540 - -
Apr2g0349 1198 Gene3D - 794 861 - -
Apr2g0349 1198 MobiDBLite consensus disorder prediction 17 35 - -
Apr2g0349 1198 MobiDBLite consensus disorder prediction 1 83 - -
Apr2g0349 1198 ProSiteProfiles Myosin motor domain profile. 192 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr2g0349 1198 Pfam IQ calmodulin-binding motif 867 883 IPR000048 GO:0005515
Apr2g0349 1198 Pfam IQ calmodulin-binding motif 924 941 IPR000048 GO:0005515
Apr2g0349 1198 Pfam IQ calmodulin-binding motif 889 905 IPR000048 GO:0005515
Apr2g0349 1198 MobiDBLite consensus disorder prediction 1178 1198 - -
Apr2g0349 1198 ProSiteProfiles IQ motif profile. 922 950 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0349 Apr-Chr2 4158875 4170685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0349 1 1192 Myosins gene family AT5G54280 63.740 0.0 1584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0349 K10357 - gmx:100819335 2008.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0349 2 4158875 4170685 Apr2g0349 2 4158875 4170685 ECH