Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0348 ATGGCAGCAACGTTGATGGCAGCCACAGCAAGCTCTGGCACTGTTATCAAACAAAGTCCTTTCCTTGGCCAAGGAAAGGGCAACAATGCCAACCCTCTTAGGGATGTTGTAGCCATGGGAACTGGGAAATACACCATGAGCAATGAATTATGGTATGGACCTGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACCCCTTCGTACTTGAAGGGAGAATTCCCAGGTGATTATGGATGGGACACTGCTGGTTTATCTGCTGACCCAGAAGCTTTTGCCAGGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCTATGCTTGGAGCACTAGGATGCATCACCCCAGAAGTGCTAGAGAAGTGGGTTAGAGTGGACTTCAAAGAGCCAGTGTGGTTCAAAGCAGGAGCTCAAATATTCTCAGAAGGAGGGCTTGACTATTTGGGTAACCCAAACCTTGTTCATGCACAAAGTATCTTGGCAGTGTTAGGCTTCCAAGTTGTTCTTATGGGTCTTGTTGAAGGGTACCGCATCAATGGCCTTGATGGGGTTGGAGAGGGTAATGATCTCTACCCTGGGGGTCAATACTTTGACCCTCTTGGTCTTGCTGATGACCCTGTCACTTTTGCTGAGCTCAAAGTGAAGGAGATCAAGAATGGTAGGTTAGCTATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGAAAAGGCCCTTTGGAGAACCTTTTGGATCACCTTGACAATCCTGTGGCTAACAATGCATGGGTCTATGCCACCAAGTTTGCACCCGGTTCTTAA 810 0.479 MAATLMAATASSGTVIKQSPFLGQGKGNNANPLRDVVAMGTGKYTMSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0348 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Apr2g0348 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 269 IPR001344 GO:0009765|GO:0016020
Apr2g0348 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Apr2g0348 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
Apr2g0348 269 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 7 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0348 Apr-Chr2 4155099 4156895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0348 1 268 Chloroplast and Mitochondria Gene Families AT1G29930 67.528 1.15e-122 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0348 K08914 - gmx:100779387 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0348 2 4155099 4156895 Apr2g0348 2 4155099 4156895 ECH