Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0339 ATGGAATCCGACACTGAGTTTCCCGAGCCAACTACTTACAGGGACCTTGACGCTATAACCAAATACCTTGACACCGAGATCGATTTCATGGCCGCAAGGAGTTACTACTCAAGGAACTACACCATTCAATTACGGAGGCACGCCGTTTCTACAATCGCCAGGCTCTCGCAGCGCGAAGATCCCGATGCATATATTCCCTACCTAGCAGTGAACTATTTCGATCGCTTTGCTTCCAGGAAACTTATTCAAGATATCACCGGTGGAACTTTGACTGAAAGAGTTCGTTTGATTGCAATATGTTGCTTCATCATTTCCGCCAAGATGAGGACAAAGCAGTTCTATCTCCCTGAGCTTCTGGGGGACAAATATGTTGATATCGAACACGAGAGGATTATGAAAATGGAGCTTCTAATTCTCGAAGAACTTGACTGGCGAATGATATCTGTAACTCCCTTTTGCTTTCTAGACCACCATTATCCCATCTTCAAAAAGATTGGTGGTTTCAAACGCCGTTGCATCAATGAGATCATAGTCCAGGCTCAAGGAGAGCACCCCTTCACTCTATTCACGCCTTCTACTATTGCAATGTCCGCTTTTCTGGCTGCTACCAAAATTGCATATCCCAATGAGTATGATTCAATAGACAAAAAGGAGGAGGAGAAAGAGTGTTGCAACAAGCTGGTTGAACTTTGTCTTAGAAAGAACATTGAGATACGTACTGAATCAGGAATTGTTATGTCTGGTAGCAAAATGGCGGCATCCCTGGAGCATGCTGAAGAAGTTGCAGCAGCCGAGACATCCGAAGAAGAGTTGGCAGAAGAGATTGAGTCAAGCATGCAAGAACATAACAAGAGCAGGGCAGCCCCCTTTTGGGCCCTGAAATCTGGAATTTTAGTAGTCAAGACCGAGGCAAAACAAAGAAGAAAGGAGGAGGACAAGGCTGGGGTCGTGGAGGCATCTAAAGAAGATGTAGCAGCAGAGACAGAGACAAACCGACAAGGACAGGACAAGGGCAAGACACGGATGGTGCCGGAAATAACTGAAGATGAGATCGAGTTCAACCAACGAAGACGGGAGAAGGGCAAAGCATTGATGGTGGTCGATGAGGAGGAGGAGGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGGACCAGTTTCACAGATTGTTCCAAAGAAGCTAATGAACTTTCACCTAAAGTGGCCAATTAGTACGCAGCTAGATATTATAGAATACATAACGGAACATGAAGCTGAACGAAAACATAAAAAAGCAAAAGCAAAAGGACATGGAAAAGCAAAAGCACAGGCACAGGCACAAGCACGGGTAGATGACCCCAGAATAGTAAGCATTCGATGTCCTGAAACAATAAGGGGGACTGGACACGATAAACCTCTAGGAAACGGGGGATTTTGTAACTGCAGCATCGTTTAG 1431 0.4549 MESDTEFPEPTTYRDLDAITKYLDTEIDFMAARSYYSRNYTIQLRRHAVSTIARLSQREDPDAYIPYLAVNYFDRFASRKLIQDITGGTLTERVRLIAICCFIISAKMRTKQFYLPELLGDKYVDIEHERIMKMELLILEELDWRMISVTPFCFLDHHYPIFKKIGGFKRRCINEIIVQAQGEHPFTLFTPSTIAMSAFLAATKIAYPNEYDSIDKKEEEKECCNKLVELCLRKNIEIRTESGIVMSGSKMAASLEHAEEVAAAETSEEELAEEIESSMQEHNKSRAAPFWALKSGILVVKTEAKQRRKEEDKAGVVEASKEDVAAETETNRQGQDKGKTRMVPEITEDEIEFNQRRREKGKALMVVDEEEEEEEEEEEEEEGPVSQIVPKKLMNFHLKWPISTQLDIIEYITEHEAERKHKKAKAKGHGKAKAQAQAQARVDDPRIVSIRCPETIRGTGHDKPLGNGGFCNCSIV* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0339 476 MobiDBLite consensus disorder prediction 368 383 - -
Apr2g0339 476 MobiDBLite consensus disorder prediction 304 339 - -
Apr2g0339 476 Gene3D - 32 147 - -
Apr2g0339 476 CDD CYCLIN 44 139 IPR013763 -
Apr2g0339 476 MobiDBLite consensus disorder prediction 260 280 - -
Apr2g0339 476 MobiDBLite consensus disorder prediction 423 442 - -
Apr2g0339 476 SUPERFAMILY Cyclin-like 29 146 IPR036915 -
Apr2g0339 476 PANTHER CYCLINS 1 332 IPR039361 -
Apr2g0339 476 MobiDBLite consensus disorder prediction 365 386 - -
Apr2g0339 476 Pfam Cyclin, N-terminal domain 18 146 IPR006671 -
Apr2g0339 476 Gene3D - 20 228 - -
Apr2g0339 476 SMART cyclin_7 50 140 IPR013763 -
Apr2g0339 476 Coils Coil 261 281 - -
Apr2g0339 476 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 332 - -
Apr2g0339 476 Coils Coil 360 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0339 Apr-Chr2 4073322 4076028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0339 17 227 Core Cell Cycle Gene Families AT1G70210 30.493 2.91e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0339 - K18812 aprc:113855478 832.402