Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0334 ATGAATGGAGACTTCAAGGTGCTAGTTTTGTGCTCTCTTCTGTTCCACTTCATACCAAGCTTCAACACCTTAAACACCATTGCTCCAGGCCAATCTGTCAAGGATAATGAGACTCTAGTTTCAACAAATGGAACCTTTGAAGCTGGGTTCTTCAACTTTGGAGATCCAAATAGCCAATACTTTGGTATATGGTACAAGGATATTTCTCCAAGAACTATTGTATGGATAGCTAATAGAGATGCACCAGTTGAAAACTCCTCAGGAGTTTTGAATGTCACTGATGGTGGAAATCTTGTTATCCTTAGTGGCACAGGATCTTTAGCTTGGTCCTCCAATGCATCAACAACTGAAAAGAAACCAGTTGTGCAACTATTGGAGAATGGGAACCTTGTTGTGAAAGAAGAAAGCAACCCAGGTAATATTGTGTGGCAAAGTTTTGATCATCCTGGGGACACTTTTCTCCCAGGGATGAAAATTCGAAGTAACAGGGAGAGTGGTAATTTTACATCTCTAACATCTTGGAGAGACACACAAGATCCTGGTAGTGGTGAGTATTCATATCACATAGATACTCATGGTTTTCCTCAAGTGGTGATTACAAAGGGAGGGACATGGTTGTATAGAGCAGGTTCATGGAATGGAAATATTTTATCTGGAATTCCTTCTGAAACATTGTTTAAATACTTTAATTTCTCTTTTGTGATAACTGATAAGGAAGTTTCTTATGGATATGAACTCTTGAACCAATCTATTGTTTCAAGATACATGCTCACTTCAACAGGCCAAATAGAACGTTTCATTTTGTCAGATCAGACAAACAATTGGCAGATTTTCCTAGCCGGCCCCGCAGACCGGTGTGATAACTATGCCATTTGTGGTGCAAATTCTAATTGTGATGTAAACAACTCTCCAACCTGTAATTGCCTTCAGGGTTTCATTCCCAAATCTCAAGAAAAATGGAATTCACAACAGTGGTCTGATGGATGTGTTAGGAGAATTGCTTTGGATTGTGGCAATAGTGATGGTTTTCTGACGTATCAGGGTGTGAAGTTGCCAGACACATCAACTTCATGGTTTGATAAGAGCATGGGCCTTGAGGAATGTAAGAATTTTTGTCTGAAAAACTGTTCTTGCACAGCATATGCAAATTTAGATATCAGAAATGGTGGAAGTGGCTGCTTACTTTGGTTTAATAACATTGTGGATGTGAGAAAACTAACTTCTGGAGGACAAGACCTTTACATAAGAGTGGCAGCTTCAGAACTAGGTCATAACAAGGGCCAGAGCAAGAAGAAGCTTGCAGGAATTCTGATAGGCTGTATTATGTTCATCATGCTCATAATAATACTGGGAGTGGTTATACTTCGGAGGAAGAAAGTCAAGAAACATGAGAAGCCAGGGAAGAACCAAATAATTGGCTGGAAGAATCACACTGATAACACAGAGAAGGAAGAAATTGACATACCAATCTTTGATCTATCAACCATAGCTAATGCAACTAATAACTTCTTCATTAGAAACAAATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACATTGTCAAATGGGCAAGATATAGCTGTGAAGAGGCTTTGCAATAATACAGGACAAGGACCAAAAGAGTTCATAAATGAAGTGAATCTAATTGCCAATCTTCAGCATAGAAATCTTGTGAAACTTCTTGGTTGTTGCATTCAAGATGATGAGAGAATCTTGATATATGAATTCATGACTAACAGAAGCTTGGACTACTTCATTTTTGATGAAACTAAAAAAAGTTTACTGCTTTGGCCTAAGCGCTTCCAAATTATATGCGGGATTGCTCGAGGACTTCTCTATCTTCATGAAGATTCTAGATTAAGGATTATCCACAGAGATCTCAAGACCAGCAATATTCTTCTTGACAAAAATATGAATCCAAAGATATCTGACTTTGGTCTTGCTAGAACATTTGGGGGAGATGAAGCTGAAGTAAAAACAAAGAGAGTAGTGGGAACTTATGGTTATATTTCTCCAGAGTATGCAGCTCGCGGGAATTTCTCAGTGAAATCTGATGTCTTCAGTTTTGGTGTTATAGCACTAGAGACAGTTAGTGGAAAGAAGAATAAGGAATATTTTGATCATCATAATCTTGACCTTCTTGGACATGCATGGATACTTTGGTGTGAAGAAAGGCCATTGGAGCTGATAGATGAATCACTGCGCAAAACAATTGCTCTAGCTGAAGCTGATGTATTAAGATGTATTCACATTGGGCTTTTATGTGTACAAGAGAGACCAGAGGACAGGCCGGACATGTCAGCTGTAATTCTAATGCTGAATGGTGAGAAAAAATTGCCCAGGCCAAGGGAACCTGCCTTTTATCCTCACCAATACTCTTCATCAGGAAATATTAAACCGCATTCAACTAATGAAATTTCTATGTCAATGTTTGAAGCAATATAG 2451 0.3876 MNGDFKVLVLCSLLFHFIPSFNTLNTIAPGQSVKDNETLVSTNGTFEAGFFNFGDPNSQYFGIWYKDISPRTIVWIANRDAPVENSSGVLNVTDGGNLVILSGTGSLAWSSNASTTEKKPVVQLLENGNLVVKEESNPGNIVWQSFDHPGDTFLPGMKIRSNRESGNFTSLTSWRDTQDPGSGEYSYHIDTHGFPQVVITKGGTWLYRAGSWNGNILSGIPSETLFKYFNFSFVITDKEVSYGYELLNQSIVSRYMLTSTGQIERFILSDQTNNWQIFLAGPADRCDNYAICGANSNCDVNNSPTCNCLQGFIPKSQEKWNSQQWSDGCVRRIALDCGNSDGFLTYQGVKLPDTSTSWFDKSMGLEECKNFCLKNCSCTAYANLDIRNGGSGCLLWFNNIVDVRKLTSGGQDLYIRVAASELGHNKGQSKKKLAGILIGCIMFIMLIIILGVVILRRKKVKKHEKPGKNQIIGWKNHTDNTEKEEIDIPIFDLSTIANATNNFFIRNKLGEGGFGPVYKGTLSNGQDIAVKRLCNNTGQGPKEFINEVNLIANLQHRNLVKLLGCCIQDDERILIYEFMTNRSLDYFIFDETKKSLLLWPKRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDKNMNPKISDFGLARTFGGDEAEVKTKRVVGTYGYISPEYAARGNFSVKSDVFSFGVIALETVSGKKNKEYFDHHNLDLLGHAWILWCEERPLELIDESLRKTIALAEADVLRCIHIGLLCVQERPEDRPDMSAVILMLNGEKKLPRPREPAFYPHQYSSSGNIKPHSTNEISMSMFEAI* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0334 816 SMART blect_4 30 149 IPR001480 -
Apr2g0334 816 SUPERFAMILY Protein kinase-like (PK-like) 486 775 IPR011009 -
Apr2g0334 816 SMART ntp_6 338 417 IPR003609 -
Apr2g0334 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 213 IPR036426 -
Apr2g0334 816 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Apr2g0334 816 ProSiteProfiles Protein kinase domain profile. 503 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0334 816 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 815 - -
Apr2g0334 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Apr2g0334 816 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Apr2g0334 816 Pfam D-mannose binding lectin 72 175 IPR001480 -
Apr2g0334 816 Pfam PAN-like domain 337 403 IPR003609 -
Apr2g0334 816 CDD STKc_IRAK 509 777 - -
Apr2g0334 816 CDD B_lectin 31 149 IPR001480 -
Apr2g0334 816 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Apr2g0334 816 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Apr2g0334 816 PIRSF SRK 4 815 IPR024171 GO:0004674
Apr2g0334 816 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 815 - -
Apr2g0334 816 Gene3D - 21 146 IPR036426 -
Apr2g0334 816 SMART serkin_6 503 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0334 816 CDD PAN_AP_plant 335 418 - -
Apr2g0334 816 Gene3D Hepatocyte Growth Factor 334 415 - -
Apr2g0334 816 Gene3D Transferase(Phosphotransferase) domain 1 579 784 - -
Apr2g0334 816 Pfam Protein tyrosine and serine/threonine kinase 506 772 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0334 Apr-Chr2 3979914 3983266 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0334 425 792 Receptor kinase-like Gene Family AT4G23190 50.670 6.34e-122 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0334 PK_Tyr_Ser-Thr 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0334 - - ccaj:109805721 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0334 2 3979914 3983266 Apr2g0334 2 3979914 3983266 ECH
Apr2g0334 2 3979914 3983266 Apr5g0051 5 475899 479227 PCT