Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0333 ATGGAAGGCTTTACCTTGCTTCTATTCTGCCTTGTCATGTTGAATACTATATTAGCCACCACAGTCAGAGACACAGTTAATACAGTGCAGCCAATCAATGATGGCCAGATCATAGTTTCAGCTGGAGAAATCTTTGCACTGGGATTCTTCAGTCCGCGAAATTCCAAAAGCCGTTATCTTGGAATTTGGTATCATAAAATCCCAACACAGACAGTAGTATGGGTTGCCAACAGAGACAACCCTCTCACTGATTCATCAGGGGTTTTGAAAATCAACGAAACTGGAATTCTAGTCCTTCTCAACCATAACAAGAGTGTTATTTGGTCTTCCAATTCAACAAGGACAGGACAATATCCGGTTGCAAAGCTTTTGGATTCTGGAAATTTCGTTGTACAGGATGGCATTAACAATGATGATCCTAATGATTTACTGTGGCAAAGTTTTGATTATCTAGTAGATACACTCTTGCCTGGCCAAAAGTTTGGAAGAAATTTAGTTACGGGCTCCAACCGATACATGTCATCATGGAATAGCTCTGATGATCCATCTCAAGGTAAATATAGTTATCAATTTGATATTAGTGGATATCCACAATTGGTTTTAAGAGAAGGCACTGGCAAAAGATTTCGTGTTGGATCATGGAATGGTGTTCAGTTTAGTGGGACACCTCAGGTGAAACAACACGGTGAATATAGATTTAATTTAGTTTCTAATGAGGACGAGATATATATTAGCTATGAAATTGCCAATAAGTCAGATCTTCATAGGCTGGTGTTAACAACAAATGGATTTGTCAAGAGGATTTACTGGAGTGATGATGAAAATGGTTGGAGAGACTTCGCATCCTTGCCTGTGGATGACTGTGATTACTATGAAAAATGTGGAGCATATGCTAGCTGTAATGTAAACAATTTTCCTGTATGCAATTGCTTGGATGGATTTGTGCACAAAACATCAGATATACACAGTAGTTGTGTGAGGAGAACTTCATTGAGTTGTGATGGAGATGGATTTTTTAAGTTTTCAGGGTTGAAATTACCTGACACAGAGAGATCCTGGTTTGATAGAAATATGAGCCTTGAAAATTGTAGGATATTGTGCATGAAGAATTGCTCCTGTACAGCTTATGCAGCTTTGGATGTCAATAATGGGCCAAGTGGGTGTTTACTTTGGTTTAATGATCTGATTGACATAAAAGAATTGACGGAAGCTGATGAAGATATATACATAAAGATGGCTGGCACAGAATTAGAAGCTATTGAAAGAAAGCAATCACATAAATCCATCACCCGGAAGCGAAAGACTGTTATCATAAGCTGTGTGTCTATTGGAATTTTAATCTTATGCTTAATCTTCATCATTTATAGATGGTGGAAGACACAGCAGAAAGGAAAGATGAAAGGCAATCCAGAAAGTGATGCAAATGTAATAGACGAGAACGAGAAGGAAGACCTAGAGTTACCCATGTTTGACTTGTCTACAATTAGATTTGCAACCAATAACTTTTCAGCTGACAACAAACTAGGGGAAGGTGGTTTTGGAGCAGTTTATAAGGGTATCCTGGATGATGGATGTGAGATAGCTGTCAAGAGGCTCTCAAAGAATTCAAGCCAAGGACTCCAAGAGTTCAAAAATGAGGTTATGCATATTGCCAAACTTCAGCACAGGAATTTAGTGAAGCTGCTAGGGTACTGCATTCAAGCAGGGGAAAGATTGCTGATCTATGAATATATGCCCAACAAAAGCTTGGATTTCTTCATATTTGATAAAAATAAGAGCAAGTTACTAGATTGGCCAAGGCGCTTGCACATTATCAATGGGATTGCTCGCGGTCTTCTTTATCTTCATCAAGATTCAAGGCATAGAATAGTTCATAGAGATCTTAAAGCCGGAAATGTTTTGCTAGATAGTGAAATGAACCCAAAAATCTCGGACTTTGGACTTGCTAGAAGCTTTGGAGGAACTGAAACCGAAGCAAACACAATGCATGTAGTTGGAACATATGGCTATCTGCCGCCAGAGTATATAATTAATGGAGCTTACTCAACAAGATCTGATGTATTCAGCTTTGGTGTGTTGATATTGGAGATAGTGAGTGGAAAGAGAAATAGAGGTTTCTGTCATGAAGATAATCTTTTGTCACATGCATGGAGACTATTTACTGAAGAAAAATGCACTGAAATAGTTAATAAAACTATAAGAGACTCACTCAATTTATCTTCAGTGCTAAGATCAGTTCATGTGGGACTACTATGTGTGCAACTAAATCCAGATGACAGGCCAAGCATGTCATCTGTGGTACTGATGTTGAGCAGTGAATGCACACTGCCTCAGCCTAAATTGCCTGGATTCTTTACAAATAGAAATATGGTTGGTGACAGTTCTTCATCAAACAGTAACAAACAATACTCAAATAATGATATCACAATCAGCCTAATGTCTGCTAGATAG 2451 0.3839 MEGFTLLLFCLVMLNTILATTVRDTVNTVQPINDGQIIVSAGEIFALGFFSPRNSKSRYLGIWYHKIPTQTVVWVANRDNPLTDSSGVLKINETGILVLLNHNKSVIWSSNSTRTGQYPVAKLLDSGNFVVQDGINNDDPNDLLWQSFDYLVDTLLPGQKFGRNLVTGSNRYMSSWNSSDDPSQGKYSYQFDISGYPQLVLREGTGKRFRVGSWNGVQFSGTPQVKQHGEYRFNLVSNEDEIYISYEIANKSDLHRLVLTTNGFVKRIYWSDDENGWRDFASLPVDDCDYYEKCGAYASCNVNNFPVCNCLDGFVHKTSDIHSSCVRRTSLSCDGDGFFKFSGLKLPDTERSWFDRNMSLENCRILCMKNCSCTAYAALDVNNGPSGCLLWFNDLIDIKELTEADEDIYIKMAGTELEAIERKQSHKSITRKRKTVIISCVSIGILILCLIFIIYRWWKTQQKGKMKGNPESDANVIDENEKEDLELPMFDLSTIRFATNNFSADNKLGEGGFGAVYKGILDDGCEIAVKRLSKNSSQGLQEFKNEVMHIAKLQHRNLVKLLGYCIQAGERLLIYEYMPNKSLDFFIFDKNKSKLLDWPRRLHIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDSEMNPKISDFGLARSFGGTETEANTMHVVGTYGYLPPEYIINGAYSTRSDVFSFGVLILEIVSGKRNRGFCHEDNLLSHAWRLFTEEKCTEIVNKTIRDSLNLSSVLRSVHVGLLCVQLNPDDRPSMSSVVLMLSSECTLPQPKLPGFFTNRNMVGDSSSSNSNKQYSNNDITISLMSAR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0333 816 SUPERFAMILY Protein kinase-like (PK-like) 485 783 IPR011009 -
Apr2g0333 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Apr2g0333 816 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Apr2g0333 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Apr2g0333 816 CDD PAN_AP_plant 329 413 - -
Apr2g0333 816 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 13 813 - -
Apr2g0333 816 Gene3D - 17 148 IPR036426 -
Apr2g0333 816 Gene3D Hepatocyte Growth Factor 330 411 - -
Apr2g0333 816 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0333 816 Pfam PAN-like domain 333 398 IPR003609 -
Apr2g0333 816 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Apr2g0333 816 CDD STKc_IRAK 508 770 - -
Apr2g0333 816 Gene3D Transferase(Phosphotransferase) domain 1 578 777 - -
Apr2g0333 816 ProSiteProfiles Protein kinase domain profile. 502 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0333 816 Pfam D-mannose binding lectin 71 176 IPR001480 -
Apr2g0333 816 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Apr2g0333 816 SMART ntp_6 333 412 IPR003609 -
Apr2g0333 816 CDD B_lectin 29 150 IPR001480 -
Apr2g0333 816 SMART blect_4 29 151 IPR001480 -
Apr2g0333 816 Pfam Domain of unknown function (DUF3403) 771 816 IPR021820 GO:0004674
Apr2g0333 816 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Apr2g0333 816 Pfam Protein tyrosine and serine/threonine kinase 504 768 IPR001245 GO:0004672|GO:0006468
Apr2g0333 816 PANTHER - 13 813 - -
Apr2g0333 816 PIRSF SRK 2 816 IPR024171 GO:0004674
Apr2g0333 816 Gene3D Phosphorylase Kinase; domain 1 476 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0333 Apr-Chr2 3972968 3977450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0333 443 804 Receptor kinase-like Gene Family AT4G23190 50.811 6.27e-122 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0333 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0333 - - gmx:100795006 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0333 2 3972968 3977450 Apr2g0333 2 3972968 3977450 ECH
Apr2g0333 2 3972968 3977450 Apr5g0049 5 461122 465222 PCT