Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0329 ATGTCTTTCATGTGGATCATTTTCCTTTGTTATCATACACTTGTGTTTCTTTCTCAAATTTCCTTGGCAGTTGACTCCGTTTCTCAAGACTCGTTCCTAAGTGATGATACTAATAACACCTTAGTTTCCAAAGATGGAACCTTTGAACTTGGATTCTTCACCCCGGGAAATTCTCAGAAACGTTACCTGGGAATTTGGTACAAGAAAATCCCAATTCAAACTGTTGTTTGGGTTGCTAATAGGCTCAATCCAATCAATGATTCATCTGGCATGTTTAGATTGAACACTAGTACTGGAAACCTTGTACTCACTCAGAATGACACTGTTGTTTGGTCTACAACTTCTCAGAGAAAACCAAAGAGTCCAATAGCTCTTCTATTAGATTCTGGCAATCTTGTGATAAGAGATGAGAATGATGCAAACACTGAAGCCTACTTGTGGCAGAGTTTTGATTACCCAACTGATACTTTCTTACCAGAAATGAAGTTTGGTTGGGACTTGAGAACTGGTCTTAATAGGCAACTAACAGCTTGGAAGAGTCCTGATGATCCATCTCCTGGTGATTTCTCTTTTGGTATGGTGCTTCATAACTATCCTGATGCATATATGATGAAGGGCAACCAAAAGTTCTATAGAAGTGGACCATGGAATGGCTTGCATTCAAGTGGTTCACCACAAGTAAGGTCCAATCCCATTTATGATTTCGAGTTTGTTTACAATAAGGATGAAGTTTATTACACATATAGCCTTAAGACCTCATCTGTGATCTCAAGGATAATACTGAATGGAACAAGCTATGTTCGAAGGCGTTATGTGTGGATTGAATTAGAAGGAAGGTGGGAGGTCTACACTTCAGTGCCATTGGACTTATGTGATAGTTATGCCCTTTGTGGAGCATATGCAAGTTGTGTTATTTCAGATTCACCAGTGTGCCAATGTTTGGAGGGGTTCAAGCCTAAGTCACCTCAAGCATGGAACTCCATGGATTGGTCTAATGGATGTGTCCGCAATAAGCCATTAAGCTGTGAGGACATACACAAGGATGGATTTATCAAATTGACTGGCCTTAAAGCTCCTGATACTACACATAGTTGGTGGGATCAGACAATTGGTTTAGAAGAATGCAGAGCCAAGTGCTTGGAAAACTGTTCTTGCATGGCTTATGCAAATTCAGATGTTAGTGGACAAGGGAGTGGCTGTGCCATGTGGTTTGGAGAGTTAATTGATATTAGACAGTTTGCAGCTGGAGGCCAGGATCTGTATGTTAGAATGGATGCTTCAGAGTTAGGACATGCCAATGAGGGCCACAAGAAGGGGGGAGTCCTGGTGGCAGTGACAGTTTCTTTGGCTGTGGTAGCCCTTTCTGGTATACTAATACTTGGTTGGTGGTATAGAAAGAAATCCCACACCAAGGTGAAAGAGAAATCAGATTTCATTATCAAAGCAGATCAAAACAGTGGAATGCTTGTGGATGATATGGATCTTCCAGTCTTTGAATTATCAACAATAGCCAAGGCAACTAACAATTTTACGATCAACAACAAAATTGGAGAAGGTGGTTTTGGACCTGTATACAGGGGAGCTCTAGCAGAAGAGCTGCAAATTGCTGTGAAGAGGCTTTCAACAAGCTCAGGACAAGGATTGACTGAGCTAAAAAATGAAGTAAAATTGATTGCAAAACTTCAACACCGCAATCTTGTAAAGCTTCTTGGATGTTGCCTTGAAGGAGAGGAAAAAATGTTGGTTTATGAATACATGCCAAATGGGAGCCTGGACTCATTTATTTTTGATCAGCAAAAAAGTGAATTACTAGACTGGTCAAAGCGGTTCCACATTATATGCGGAATTGCTAAAGGACTTCTGTATCTGCATCAAGATTCCAGACTAAGGATTATTCACAGGGATCTCAAAGCAAGCAATGTTTTACTTGATAATGAGTTGAACCCCAAAATTTCAGACTTTGGCATGGCAAGAATTTTTGGAAGAGATCAGAACGAAGGAAACACAAAGAGAATAGTTGGAACTTATGGTTATATGGCACCAGAATATGCAACTGATGGGTTATTTTCAGTAAAATCTGATGTTTTCAGCTTTGGAGTGTTATTGCTAGAGATTATATCTGGAAAGAGAAGTAGAGGGTATTATAATCAGAACCACAGTCATAATCTCATAGGCCATGCATGGAAACTTTGGAAGGACGGAAGACCACTAGAACTGATTGATAAAAGCCTAGTAGACTCTTGTTTTGAGTCACAAATGTTGCATTGCATTCATGTTAGTCTCTTGTGTGTTCAACAGCATCCAGAGGATAGGCCTGGAATGTCATGTGTGCTCCTAATGTTAGTGAGTGAGTTTGAATTGCCTGAGCCAAAACAGCCAGGATTCTTTGGAAAATATTCAGATGAAGCAGACTCATTCACAAGTAAGCAGCAACTAAGTTCAGCAAATGAAATAACCATTACCTTATTAGAAGCTCGTTGA 2481 0.4002 MSFMWIIFLCYHTLVFLSQISLAVDSVSQDSFLSDDTNNTLVSKDGTFELGFFTPGNSQKRYLGIWYKKIPIQTVVWVANRLNPINDSSGMFRLNTSTGNLVLTQNDTVVWSTTSQRKPKSPIALLLDSGNLVIRDENDANTEAYLWQSFDYPTDTFLPEMKFGWDLRTGLNRQLTAWKSPDDPSPGDFSFGMVLHNYPDAYMMKGNQKFYRSGPWNGLHSSGSPQVRSNPIYDFEFVYNKDEVYYTYSLKTSSVISRIILNGTSYVRRRYVWIELEGRWEVYTSVPLDLCDSYALCGAYASCVISDSPVCQCLEGFKPKSPQAWNSMDWSNGCVRNKPLSCEDIHKDGFIKLTGLKAPDTTHSWWDQTIGLEECRAKCLENCSCMAYANSDVSGQGSGCAMWFGELIDIRQFAAGGQDLYVRMDASELGHANEGHKKGGVLVAVTVSLAVVALSGILILGWWYRKKSHTKVKEKSDFIIKADQNSGMLVDDMDLPVFELSTIAKATNNFTINNKIGEGGFGPVYRGALAEELQIAVKRLSTSSGQGLTELKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEYMPNGSLDSFIFDQQKSELLDWSKRFHIICGIAKGLLYLHQDSRLRIIHRDLKASNVLLDNELNPKISDFGMARIFGRDQNEGNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLLEIISGKRSRGYYNQNHSHNLIGHAWKLWKDGRPLELIDKSLVDSCFESQMLHCIHVSLLCVQQHPEDRPGMSCVLLMLVSEFELPEPKQPGFFGKYSDEADSFTSKQQLSSANEITITLLEAR* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0329 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Apr2g0329 826 ProSiteProfiles Protein kinase domain profile. 510 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0329 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 184 IPR036426 -
Apr2g0329 826 ProSiteProfiles Bulb-type lectin domain profile. 26 147 IPR001480 -
Apr2g0329 826 Gene3D Transferase(Phosphotransferase) domain 1 586 788 - -
Apr2g0329 826 CDD PAN_AP_plant 339 423 - -
Apr2g0329 826 SMART serkin_6 510 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0329 826 SMART blect_4 32 153 IPR001480 -
Apr2g0329 826 SMART ntp_6 345 424 IPR003609 -
Apr2g0329 826 PANTHER - 28 823 - -
Apr2g0329 826 Pfam D-mannose binding lectin 74 179 IPR001480 -
Apr2g0329 826 Pfam Protein tyrosine and serine/threonine kinase 511 776 IPR001245 GO:0004672|GO:0006468
Apr2g0329 826 PIRSF SRK 1 826 IPR024171 GO:0004674
Apr2g0329 826 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Apr2g0329 826 Pfam PAN-like domain 346 410 IPR003609 -
Apr2g0329 826 SUPERFAMILY Protein kinase-like (PK-like) 492 781 IPR011009 -
Apr2g0329 826 ProSiteProfiles PAN/Apple domain profile. 342 425 IPR003609 -
Apr2g0329 826 CDD STKc_IRAK 516 781 - -
Apr2g0329 826 Pfam Domain of unknown function (DUF3403) 785 826 IPR021820 GO:0004674
Apr2g0329 826 Gene3D - 21 150 IPR036426 -
Apr2g0329 826 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Apr2g0329 826 CDD B_lectin 37 153 IPR001480 -
Apr2g0329 826 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 823 - -
Apr2g0329 826 Gene3D Phosphorylase Kinase; domain 1 470 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0329 Apr-Chr2 3934104 3938395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0329 441 795 Receptor kinase-like Gene Family AT4G23230 54.749 1.32e-130 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr2g0329 PK_Tyr_Ser-Thr 2e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0329 - - gmx:100778155 1431.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0329 2 3934104 3938395 Apr5g0030 5 219160 231525 PCT