Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0327 ATGGCAGATGAACAATTTCAAGCAAGTGGAAATTGGTGGGACACAGCAAGAAACGTGAGGTATGAAAGTGGGGCATCACAATCATCTTCCTCTGCCATCACCAACATAGGCACTTTTGCTTGGCAACAAGCTTCAGATATGGCAGACATGAAACCAAGGTCTTCTTTGGATTCCTCTTCGGTGGTTTTCCATGACACACAGAATAAGCTTCAACCACCAGATTCTTCCACTTCCACTGACCCCAACTTGCATATGATGGGTTTGGGCCTTTCATCCCAAGCCATGGAATGGAATCAAGCATCCTTGTTGCGAGGAGAGAAGGGTACTGAGAACAGTTTCAGGTCTATGTTGCAAGATAATTTGGGGTCCTCAAGAACCAATTTTCAGCAAGAAACTGGGATGGGGTTGTCTCAACAAGTTCAATGGAGGCCAGAGAAGTTGTTCACTGCAGAGTCTTCAACTAATGAGTTCAAGCAAGTGAATAGGGGTTTCTCTTTGGATCAAAACCAGTTTAGTCCTCAATATAGCTCTGGGAATAGCACTGGCACAAGCCAAGGGTTACCCTCTACTACTAATTTTCAGATGGATTCTTCAGCCTTATATGGAACCCCTTCAATATTACAAGGAGTACTATTGGGACCTGACAACAATAATAATCAACAACAACAACAACAAGCTTCTTCCTTTGAGAATCGCACCATGAGTTTTCCTTATCCAACAAGCTATGGATTGAACACTAATGAGTTGATACCTTCTTGGTCTAAAGTTCCTCAGTTCTTGAGAACTTCACCTCCAAAACAACAACCACCCAATAACCAGTTGCATTTCACTAACAACGCACCCTTTTGGAACGCTTCTGAGGCTGCAAACATCAAAGATGTTCGCTCCAGCTTTTTCCCCTCATTGCAACCCGCCTTCTCGACACCAAATTTTGATGCACAATCAAAGAATATATCTGAAGTCAGAGACTCGGGTACAGTGGTAAAGAAAAGTGGGAATGAGCCAGCACCCAAAAGGACCCGTAACGAAACCCCATCTCCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTAGTGTCGCCTTTCGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCGATTGAATACATCAAATTCCTTCACGAACAGGTTACTGCTTTAAGCACCCCGTACATGAAAACTGGAGCTCAAGTACAGATTCAACAGAATTCAGGCAAATCTAAGGAAGCTGAAGGTCCAAAGCAAGATCTTAGAAGCCGAGGGCTTTGCTTGGTGCCGGTTTCTAGTACATTTCCAGTGACTCATGAAACCACAGTTGATTTTTGGACACCAACATTCGGAGGAACTTCAAGATAA 1389 0.4377 MADEQFQASGNWWDTARNVRYESGASQSSSSAITNIGTFAWQQASDMADMKPRSSLDSSSVVFHDTQNKLQPPDSSTSTDPNLHMMGLGLSSQAMEWNQASLLRGEKGTENSFRSMLQDNLGSSRTNFQQETGMGLSQQVQWRPEKLFTAESSTNEFKQVNRGFSLDQNQFSPQYSSGNSTGTSQGLPSTTNFQMDSSALYGTPSILQGVLLGPDNNNNQQQQQQASSFENRTMSFPYPTSYGLNTNELIPSWSKVPQFLRTSPPKQQPPNNQLHFTNNAPFWNASEAANIKDVRSSFFPSLQPAFSTPNFDAQSKNISEVRDSGTVVKKSGNEPAPKRTRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTALSTPYMKTGAQVQIQQNSGKSKEAEGPKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0327 462 CDD bHLH_AtbHLH_like 348 399 IPR045239 -
Apr2g0327 462 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 8 451 - -
Apr2g0327 462 MobiDBLite consensus disorder prediction 210 231 - -
Apr2g0327 462 SMART finulus 353 397 IPR011598 GO:0046983
Apr2g0327 462 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 451 - -
Apr2g0327 462 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 342 391 IPR011598 GO:0046983
Apr2g0327 462 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 352 409 IPR036638 GO:0046983
Apr2g0327 462 MobiDBLite consensus disorder prediction 309 326 - -
Apr2g0327 462 MobiDBLite consensus disorder prediction 168 195 - -
Apr2g0327 462 MobiDBLite consensus disorder prediction 409 428 - -
Apr2g0327 462 Gene3D - 352 416 IPR036638 GO:0046983
Apr2g0327 462 MobiDBLite consensus disorder prediction 46 82 - -
Apr2g0327 462 MobiDBLite consensus disorder prediction 309 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0327 Apr-Chr2 3916561 3920192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0327 104 462 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 46.954 6.40e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0327 - - gmx:100778697 766.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0327 2 3916561 3920192 Apr2g0327 2 3916561 3920192 ECH