Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0318 ATGGATTCGCAGCAGCTTTTCAGTTATGGTGTGACTAGTGCTGAATTACCTTACATGTCATCTTTTCCTACTATTCCATCTCTACCTAACAGGTTTCTCGGATCCTTGAAATTTGACTCAGGAAACTCACCTAATTCACCCTTTTCCACTCATTTTGATTCTGACACCCTTTCTGCATTGAGTGACAACCTGGAGCAACGCAGCCCTGGAGAGATCCTATCTGGTGTTAGCCCCTTTTGTAACTCTTTACTAGAAACCAACCATTATATGCATAGATCAATCTCATCTGTGGACAGTCTCAAAGACAGTTTCCCGCTATATTCTGCTAGGAACACTCTTCAACAGAATGCAAGTTGTAACCAAAAAATAAAACACGTTTTGCTGGAATTAGAAAGTGCTTTGATGGCCCCTGATGATGATGAAGTTACCACGCCAAATACGTTGGGTGAGAGCAATAGGCCGATGACTTCTGGCCGGAGATTCAGGTCTTGGAGCCATGAGCACCAGGGTTCACAATATACTCAGAATCAGCCATCATATGCTACCAGCAGTAGGCAATCAAGTGAAGTTGTACAGGCAGAAAAACGGCAAAAGTTGATGGAGGAATCATCACTACAAGGTCTCCCATCAAAGAATTTGAAGCAATTGCTGATTGCTTGTGCCAAAGCCTTGTCTGAAAACAACATGAAAGATTTTGATCAATTGGTAGGAAAGGCTAGAAATACTGTGTCTATCAATGGGGATCCAATTCAGAGGCTTGGTGCTTATATGGTAGAAGGGCTTGTTGCAAGGAAGGAAGCATCAGGGAATAGTATCTATCATGCCCTTAGATGCAGAGAGCCCGAAGGCATAGAATTACTCTCTTACATGCAATTGCTGTTTGAAATCTGCCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGAGCCATTGCTGAAGCATGCAGAAATGAGGATCACATTCACATCATAGACTTTCAAATTGCTCAGGGCTCTCAATGGATGACTCTTCTTCAAGCTCTAGCAGCAAGGCCCGGTGGGGCACCCCGTGTGCGAATCACTGGGATCGATGATCCTGTTTCTAAATATGCTCGCGGTGGTGATGGACTAGAGGTAGTTGGGAAAAGGTTGGCCTTGATGTCTGAGAAATTTGGCATCCCAGTTGAGTTTCATGGAGTGCCAGTTTTTGCTCCTGATGTTAGAAGAGAAATGCTTGATATCAGGCCTGGAGAGGCTTTGGCTGTGAACTTTCCCTTGCAACTCCATCATACAGCTGATGAGAGTGTTGATGTGAATAATCCAAGGGATGGACTTCTAAGATTGGTAAAGTCACTTTCTCCCAAGGTGACGACACTGGTGGAGCAGGAATCAAACACAAACACAACTCCTTTCTTCAACAGGTTTATTGAAACCTTAGATTATTACTTGGCAATCTTTGAGTCTATTGATGTCACCCTCCCCAGAAATAGCAAGGACAGGATTAATGTGGAGCAACATTGTTTGGCCAGGGATATCGTGAATATTATTGCTTGTGAGGGCAAGGAAAGGGTAGAGAGACATGAACTGTTTGGCAAGTGGAAGTCAAGGTTAACAATGGCTGGCTTTCGTCAGTGCCCTTTGAGCTCTTATGTGAATTCTGTAATTAGAAGCCTTCTCAAGTGCTATTCAGAACATTACACATTAGTGGAGAAAGATGGAGCAATGTTGTTGGGGTGGAAGAACAGAAATTTGATATCAGCTTCAGCTTGGCATTGA 1755 0.4342 MDSQQLFSYGVTSAELPYMSSFPTIPSLPNRFLGSLKFDSGNSPNSPFSTHFDSDTLSALSDNLEQRSPGEILSGVSPFCNSLLETNHYMHRSISSVDSLKDSFPLYSARNTLQQNASCNQKIKHVLLELESALMAPDDDEVTTPNTLGESNRPMTSGRRFRSWSHEHQGSQYTQNQPSYATSSRQSSEVVQAEKRQKLMEESSLQGLPSKNLKQLLIACAKALSENNMKDFDQLVGKARNTVSINGDPIQRLGAYMVEGLVARKEASGNSIYHALRCREPEGIELLSYMQLLFEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGSQWMTLLQALAARPGGAPRVRITGIDDPVSKYARGGDGLEVVGKRLALMSEKFGIPVEFHGVPVFAPDVRREMLDIRPGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVTTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLPRNSKDRINVEQHCLARDIVNIIACEGKERVERHELFGKWKSRLTMAGFRQCPLSSYVNSVIRSLLKCYSEHYTLVEKDGAMLLGWKNRNLISASAWH* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0318 584 Pfam GRAS domain family 213 583 IPR005202 -
Apr2g0318 584 MobiDBLite consensus disorder prediction 144 159 - -
Apr2g0318 584 MobiDBLite consensus disorder prediction 167 190 - -
Apr2g0318 584 ProSiteProfiles GRAS family profile. 204 584 IPR005202 -
Apr2g0318 584 MobiDBLite consensus disorder prediction 137 196 - -
Apr2g0318 584 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 584 IPR005202 -
Apr2g0318 584 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0318 Apr-Chr2 3764199 3768700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0318 203 583 GRAS Transcription Factor Family AT5G48150 62.827 4.45e-174 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr2g0318 GRAS 3.1e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0318 - - gmx:100799073 991.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0318 2 3764199 3768700 Apr2g0318 2 3764199 3768700 ECH
Apr2g0318 2 3764199 3768700 Apr5g0011 5 87468 90985 PCT