Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0317 ATGAAAGAAGAGTCAACTGGACTAATAATTGGGATTTCCATCGGTGTGGTAATTGGAGTTGGTTTGGCAATTTCTGCATTGTTCTGTCTTAGATATCATAGGAAGCGCTCACAGATTGGCAATAGCAGTTCACGGAGGGCGGCTACAATACCTATTCGCGAAAATGGTGCTGATTCTTGCACCATTCTATCAGACTCAACCTTAGGTCCTGATTCACCTGTAAGGTCTGGTCGTAATGGCATGTCCCTCTGGCTTGATGGCTTCAAGAAGACTAGTAACATGGTTTCAGCATCTGGAATACCAGAATACTCATACAAGGATTTGCAAAAGGCAACATATAATTTTACAACGCTCATAGGACAAGGTGCATTTGGTCCTGTTTACAAAGCTCAGATGTCTACTGGCGAGATTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTCATACAGAGGTTATGCTGTTGGGAAGGTTGCACCATAGAAATCTGGTCAATTTGGTTGGTTATTGTGCAGAGAAGGGACAACATATGCTTGTATATGTCTACATGAGTAAAGGCAGCTTAGCTTCCCACTTGTATAGTGAAGAGAATGGGGCACTGGGCTGGGATTTGAGGGTTCATATAGCTTTAGACGTAGCAAGAGGCGTAGAATATCTTCATGATGGGGCAGTTCCTCCTGTAATCCATCGAGATATCAAATCTTCCAATATTCTTCTTGATCAGTCTATGAGAGCCAGGGTTGCTGATTTTGGACTTTCAAGAGAAGAGATGGTGGATAAACATGCAGCTATCCGTGGTACCTTCGGCTATCTTGACCCTGAGTATATATCTTCAGGGACATTCACTAAGAAAAGTGATGTATACAGTTTTGGAGTGTTGCTCTTTGAACTTATAGCTGGCCGAAATCCTCAGCAGGGTCTTATGGAATATGTTGAGCTTGCAGCAATGAATACTGAGGGGAAAGTTGGTTGGGAGGAGATTGTTGATTCTCGGCTGGAGGGAAAATGTGATTTTCAAGAGCTGAATGAAGTGGCTGCTCTTGCCTACAAATGCATCAACCGTGCCCCAAAGAAACGCCCTTCCATGAGGGACATAGTGCAAGTGTTGACACGTATCCTTAAGTCAAGGCACCAAAGGAATCATCACATGAAGTCTCTCTCAGCCACGGGAGATGAAGTTTCCATTGATGTTGATCAGCTAGAAACAAAGAGTTCTGTTGCTACCCACCAAAGAGAAGAATCTATAGATAGTGCAGCTGACATGTATGATGTGTAG 1293 0.4308 MKEESTGLIIGISIGVVIGVGLAISALFCLRYHRKRSQIGNSSSRRAATIPIRENGADSCTILSDSTLGPDSPVRSGRNGMSLWLDGFKKTSNMVSASGIPEYSYKDLQKATYNFTTLIGQGAFGPVYKAQMSTGEIVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSKGSLASHLYSEENGALGWDLRVHIALDVARGVEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEMVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGKVGWEEIVDSRLEGKCDFQELNEVAALAYKCINRAPKKRPSMRDIVQVLTRILKSRHQRNHHMKSLSATGDEVSIDVDQLETKSSVATHQREESIDSAADMYDV* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0317 430 SMART serkin_6 113 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0317 430 Gene3D Transferase(Phosphotransferase) domain 1 189 401 - -
Apr2g0317 430 SUPERFAMILY Protein kinase-like (PK-like) 102 386 IPR011009 -
Apr2g0317 430 PANTHER OS01G0253100 PROTEIN 5 405 IPR045271 GO:0004714|GO:0006468
Apr2g0317 430 Gene3D Phosphorylase Kinase; domain 1 83 188 - -
Apr2g0317 430 ProSiteProfiles Protein kinase domain profile. 113 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0317 430 Pfam Protein tyrosine and serine/threonine kinase 115 375 IPR001245 GO:0004672|GO:0006468
Apr2g0317 430 CDD STKc_IRAK 119 378 - -
Apr2g0317 430 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 5 405 - -
Apr2g0317 430 MobiDBLite consensus disorder prediction 407 430 - -
Apr2g0317 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0317 Apr-Chr2 3737832 3742240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0317 24 424 Glycoside Hydrolase AT3G07070 37.292 5.42e-75 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Apr2g0317 PK_Tyr_Ser-Thr 5.3e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0317 - - gmx:100799586 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0317 2 3737832 3742240 Apr2g0317 2 3737832 3742240 ECH
Apr2g0317 2 3737832 3742240 Apr5g0010 5 68574 76955 PCT