Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0309 ATGTCTCAACCAATCATCCTTTTCTTCTTCTTCTTCTTCTCTTTCTTCACTCTTTCACTCTCACACAACAACACCACCACAACATTCTTCAACTTCCCCTCCTTCACCCTCCGCAACATCACTCTCCTCGGTGACTCCTTCCTCCGAAACGGTGTCGTTGGCCTCACGCGTGCCACCCCTGTTCCTGCTTCCTCCTCCGGCACCCTCCTCTTCAACACACCACTCCCTCACACCCTCTCTTCCTTCTCCACCACCTTCTCCTTCTCCTTCACCAACACCACCGCTGCCACTTCCTCCACCTTCACCTTCTTCCTCAACTCTTCCCTCTCTCTCCTCTTCATGCCCCACCAAAACCACCTCATTTTTCACTCTAACTCCACCCAAACCACTCTTCCGACACTTCACAACATTGATCTCGCAAGTGGAAGCTTAATCACTTCATGGGTCGATTACAGTTTTGATAAAAAAAAGTTCTTCGTTTTCTTGAACTATTCCACTTCTTCTTCCAAGCCTAAAAATCCAATCTTTACCGTTGACTTTGACCTTTCTGAGTACTTTAAGGAGAATCTCTATGTGGGGTTTTCGGGTTCAACTCAGGGGAGCACTGAGCTTATCCAAGTTATGAGTTGGAGCTTTGAGTTTGAGACATTTCAAAAACCGAGTTCGAATTTGAATTCCCATAATGATTCTTCTAGAAGCCCCGTAAGTGTTGTTGCTGTTGAGGCTTCGAATTCCACCAAGGTTGGGAAGAGGTTTGCAATTGGTGTTGCAATTGCTGGTCCTGCTTTTTTCTTTGTGTTGCTTTTGGTTTTGGTGTATGTTTCTTTTGTGAAATGGCGTGGTGTGAAGAAGCACAAGAGTATGGGGACTAGTTTTGTTGTGGCGTGTCCTAAGGAGTTTGGTTACAAGGAGTTGAAGTTAGCTACTAAAGGGTTTCATGTTTCTAGGGTCATTGGGAATGGATCATTTGGGACAGTGTACAAGGCATTGTTTGAGTCTTCAGGAGCCATTGCCGCGGTGAAAAGGTCAAGACAATATTCGCATGATGAGGGTAAAGCTGAGTTTTTGGCTGAGCTTTCTATTATAGCTGGTTTGAGGCACAAGAATTTGGTTCAGCTTCAAGGCTGGTGTGTTGAGAAGGGTGAGTTGTTGCTTGTGTACGAGTTTATGCCAAATGGGAGTTTGGATAAGATGCTTTACCAAGAATCTGAATGTGGTGGTGGTAATAGTGTGTTGAGTTGGTTTCATAGGTTTAACATTGCTGTTGGGTTGGCTTCTGTTTTGAGTTATTTGCATCAAGAGTGTGAGCAAAGAGTGATTCATAGAGATATTAAGACTGGTAACATATTGCTAGATGTGAACATGAATCCAAGATTGGGTGATTTTGGATTGGCTAAGCTTATGGATCATGATAAGAGTCCTGTTTCTACACTAACTGCTGGAACAATGGGGTACCTTGCTCCTGAGTATCTTCAATGTGGAGTGGCAAATGAAAAAACTGATGTTTTTAGCTATGGAGTGGTTGTGCTTGAAGTGGCTTGTGGTAGAAGGCCAATTGAGAAAGAGGGGCAAAAGATGGTGAATTTGGTTGATTGGGTTTGGGGTTTGCACTCTCAAGGGAAGATCATTGAGGCTGCAGATAAAAGGTTGAATGGTGAGTTTCATGAAGAGGAAATGAGGAAGCTTTTGTTATTGGGATTGAGTTGTGCAAACCCTGACAGTGCACAAAGGCCTTCCATGAGAAGGGTGTTGCAAATTCTCAACAATGAAGCTGTGACTCTTCTGGTGCCTAAAGTGAAACCAACACTAACATTCACTTCGGGCTTGCCTTTGACTCTTGATGAGATAGTTTCTGATGCTGAAGAAGAAGACTTGAATTGTGGCCAGTTTGTCTGTGAGATAAAAATTGATTGA 1914 0.4368 MSQPIILFFFFFFSFFTLSLSHNNTTTTFFNFPSFTLRNITLLGDSFLRNGVVGLTRATPVPASSSGTLLFNTPLPHTLSSFSTTFSFSFTNTTAATSSTFTFFLNSSLSLLFMPHQNHLIFHSNSTQTTLPTLHNIDLASGSLITSWVDYSFDKKKFFVFLNYSTSSSKPKNPIFTVDFDLSEYFKENLYVGFSGSTQGSTELIQVMSWSFEFETFQKPSSNLNSHNDSSRSPVSVVAVEASNSTKVGKRFAIGVAIAGPAFFFVLLLVLVYVSFVKWRGVKKHKSMGTSFVVACPKEFGYKELKLATKGFHVSRVIGNGSFGTVYKALFESSGAIAAVKRSRQYSHDEGKAEFLAELSIIAGLRHKNLVQLQGWCVEKGELLLVYEFMPNGSLDKMLYQESECGGGNSVLSWFHRFNIAVGLASVLSYLHQECEQRVIHRDIKTGNILLDVNMNPRLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQCGVANEKTDVFSYGVVVLEVACGRRPIEKEGQKMVNLVDWVWGLHSQGKIIEAADKRLNGEFHEEEMRKLLLLGLSCANPDSAQRPSMRRVLQILNNEAVTLLVPKVKPTLTFTSGLPLTLDEIVSDAEEEDLNCGQFVCEIKID* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0309 637 Gene3D - 114 266 - -
Apr2g0309 637 Pfam Legume lectin domain 124 223 IPR001220 GO:0030246
Apr2g0309 637 CDD STKc_IRAK 318 589 - -
Apr2g0309 637 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 20 97 - -
Apr2g0309 637 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 130 605 - -
Apr2g0309 637 ProSiteProfiles Protein kinase domain profile. 312 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0309 637 SUPERFAMILY Protein kinase-like (PK-like) 298 608 IPR011009 -
Apr2g0309 637 PANTHER - 130 605 - -
Apr2g0309 637 PANTHER - 20 97 - -
Apr2g0309 637 Gene3D Phosphorylase Kinase; domain 1 274 389 - -
Apr2g0309 637 Gene3D Transferase(Phosphotransferase) domain 1 390 595 - -
Apr2g0309 637 Pfam Protein kinase domain 312 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0309 637 Gene3D - 25 113 - -
Apr2g0309 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Apr2g0309 637 ProSitePatterns Protein kinases ATP-binding region signature. 318 341 IPR017441 GO:0005524
Apr2g0309 637 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 217 IPR013320 -
Apr2g0309 637 SMART serkin_6 312 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0309 Apr-Chr2 3694778 3696691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0309 1 624 Receptor kinase-like Gene Family AT5G55830 53.372 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Apr2g0309 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0309 - - gmx:100808744 822.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0309 2 3694778 3696691 Apr2g0309 2 3694778 3696691 ECH