Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0301 ATGGAAAATTTGGTAGCTGAGGAGGAACACATCTTTCGTAGCCAATACTCACCTGTCCCAGTTCCTGACAATGTGACATTGCCGGAATTTGTGCTCCAAAATGCTGAATTATATGCTGACAAGGTTGCATTTGTGGATGCTGTGACTGGAAAAGGGATCACTTATAGTGAGGTGGTGAAGAGCATACAAAGGTTTTCAAAGGCCTTAAGATCACTTGGTCTGAGGAAGGGTCATGTTGTGATCGTAGTACTTCCAAATGTAGTAGAATATGCAATTATTGCTTTGGGAATAATGGCTGCTGGTGGAGTGTTCTCAGGGGCAAATCCAGCATCACATGCATCAGAAATTAAAAAACAGGCTGATTCTGCTGATGCCAAATTAATTGTCACAAATATCACAAACTTTGAAAAGGTGAAGGGTCTAGAGCTACCTATTATTGTGCTGGGAGATGAAATTGTGGAAGGAGCTATGAATTGGAACAAATTGCTTGAAGCAGCAAACCGTGCAGGTGATGATTTGACAAGGGAGCCTATTCAGCAGAATGACCTTTGTGCCATGCCATTCTCATCAGGCACCACAGGAATGTCAAAGGGTGTGATGCTTACTCATAGAAATCTAGTGGCTAATCTTTGCTCTACACTCTTTGGTGTTGGGCCAGAAATGGTGGGTCAGGTCACCACACTGGGCTTGATTCCCTTCTTTCACATTTATGGCATCACTGGAATATGTTGTGCCACTCTTAGGAGTAAAGGGAAAGTTGTGGTGATGGGAAGGTTTGAGTTGAAAACATTTCTCAATGCCTTGATCACATATGAGGTCAAATTTGCACCCATTGTGCCACCAATCATTCTCAGCTTGGTAAAAAATCCCATAGTAGATGAATTTGACCTCAGCAAGCTAAAACTCCAGGCCATTATGACTGCAGCAGCACCACTTGCCCCAGAGCTCCTTACTGCCTTTGAACACAAATTCCCTGGTGTTGTTGTCCAAGAGGCATATGGACTAACTGAGCATAGCTGCATCACACTCACTCATGCACAAAAAGGATTGGTAGATCCTCGTAAAAATTCGGTGGGATTCATCCTCCCAAATTTGGAAGTCAAGTTTGTTGATCCTGACACTGGTCGGTCCCTCCCAAGGAACACACCCGGGGAACTCTGTGTAAGAAGCCAATGTGTCATGCAAGGTTACTATAAACAGGTGGATGAGACTGCTCAGACCATTGACAAGAATGGATGGCTTCACACTGGTGACATAGGATTTATAGATGATGAAGAAAATGTATTTATTGTTGATCGTATCAAAGAGTTGATTAAGTACAAAGGCTTCCAAGTTGCTCCTGCAGAGTTAGAGGCCATTTTGCTGACACATTCATCGGTTGAAGATGCAGCTGTAGTGCCATTACCAGATGAAGAAGCAGGGGAAATCCCAGCTGCAAGTGTTGTTTTGAGTCCAGGTGCAAGAGAGACTGAGGAGGACATCATGAACTATGTTGCTTCCAATGCTGCACATTACAAGAAAGTGAGAGTGGTACACTTTGTGGAAGCCATACCAAAATCACCTTCTGGGAAAATAATGAGAAGGCTTGTCAAAGAGAAGATGCTAACAATTGATAAACAATAA 1623 0.4313 MENLVAEEEHIFRSQYSPVPVPDNVTLPEFVLQNAELYADKVAFVDAVTGKGITYSEVVKSIQRFSKALRSLGLRKGHVVIVVLPNVVEYAIIALGIMAAGGVFSGANPASHASEIKKQADSADAKLIVTNITNFEKVKGLELPIIVLGDEIVEGAMNWNKLLEAANRAGDDLTREPIQQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVGPEMVGQVTTLGLIPFFHIYGITGICCATLRSKGKVVVMGRFELKTFLNALITYEVKFAPIVPPIILSLVKNPIVDEFDLSKLKLQAIMTAAAPLAPELLTAFEHKFPGVVVQEAYGLTEHSCITLTHAQKGLVDPRKNSVGFILPNLEVKFVDPDTGRSLPRNTPGELCVRSQCVMQGYYKQVDETAQTIDKNGWLHTGDIGFIDDEENVFIVDRIKELIKYKGFQVAPAELEAILLTHSSVEDAAVVPLPDEEAGEIPAASVVLSPGARETEEDIMNYVASNAAHYKKVRVVHFVEAIPKSPSGKIMRRLVKEKMLTIDKQ* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0301 540 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 5 536 - -
Apr2g0301 540 SUPERFAMILY Acetyl-CoA synthetase-like 13 535 - -
Apr2g0301 540 Gene3D - 436 536 IPR045851 -
Apr2g0301 540 Gene3D - 9 435 IPR042099 -
Apr2g0301 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 536 - -
Apr2g0301 540 Pfam AMP-binding enzyme 33 440 IPR000873 -
Apr2g0301 540 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Apr2g0301 540 Pfam AMP-binding enzyme C-terminal domain 449 524 IPR025110 -
Apr2g0301 540 CDD 4CL 21 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0301 Apr-Chr2 3621271 3624905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0301 7 540 Monolignol Biosynthesis Gene Families AT1G62940 72.761 0.0 795
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0301 K01904 - gmx:100811418 964.14