Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0288 ATGACTGTGAACAATCGCTGCTTCGTGGAATGGAAAGAGCAGTTCGTTTCGCAGGAGCGCGGTAATCGCGTGGTTCACTATTACCTGAAGGATTCTGCTGGGGAATCCGTCCTTGCAGTTGTGGGCACTGAGAGGAGTGTTAGACACATGTGCTATGTTGTTGCTGAGGAGTTCCTCGAGATTTGTGGGAAGGAGGGTTCCATTCCAACTGGTTTCAAATGGAGATCTAGAAGAGAGGTTGTGGATTGGCTGACATCTACTCTATCAAAGCAACATCTGCAGGGCGATAGAAGTGTATCACCTGGTCATAATTTGTTACAAGCTCATGAGCCCACAAATGGGAGCGTCAATGAAATTACTGGTCTGTCTGCACAAATAACAGATGACAAGGACTGTTCAATGAGTAACTCTAAATTATCCAATTCAGACATAGTTTGGTCAGGAGTTGCGTGGACATGTGGCAAACAATTAAAGCATTATCCTTCCTTTTGCAGGAATGGGATCAAAATAGTGATTCAATCCTTTGTTTTTGTAATGGGGAAGGGAGAGAATCATTATATTGCTTATGTAGAGGATATGTATGAAGACAGGAGGGGGCAGAAAAAGGTTAAAGTAAGATGGTTTCACCATAATCAGGAAGTTAAGGGTGTAATTCCTGTACGAAATCCTCACCCAAGGGAAGTTTTTATCACACCTTATTCTCAAGTCATTAGTGCAGAGTGTGTTGATGGTCCTGCTGCAGTCTTAACTCGTGAACACTACGAAAAATGCATGCCTTTTTTTTCCCCCACTTCAACGGACAGAATACATCTCTGTTTTAGGCAATTTAGAAGCAACAAAGTGAAGCCCTTTGACTTGAGTAAACTGCGTGGCTACTACACTCAACCAGTGCTTGGTTGCTTGCACCTTGATTCGGTCCAGAATCCTGAGTCTAAGAGCAATAGCCTTCCAGGAGAAGATGAAGAGTTGAGTGCAGGTGATGATGTAAAGCTAGGAGCTAAGAGGAGCAGAAATGATAAGGGATCTTCTCAGTCTTGGATAGGTCGCCAGGGAGTAAGGAAGTTAATTGGAAGTAAGGAAATGATGGTATACAAAACTTTCCAGGTTGCAAATTATGCAAGCTCGGAAAGGAGATTGCTTTCTCTGAAGCAGGTTGAATGTCAGCCTTGGTATAACCATGCATATAAGGTTGATAACAAGATAGAGTTGCTTTGTCAAGATAGTGGCATCAGAGGTTGCTGGTTCAGGTGTACAGTTGTTCAGGTAGCCCGGAAACAGTTGAAAGTCCAATATGATGATGTTCAGGATGAAGATGGAAGTGGAAATCTTGAGGAATGGATCCCTGCTTTCAAGTTGGCCATGCCTGATAAACTTGGGATGAGGCATGCTGGCCGACCCACAATCAGGCCAGCTCCAACTTACAAGGAACAAGAACTGGCCATTGAGGTTGGAAATGCAGTTGATGCATGGTGGAGCGATGGCTGGTGGGAGGGGGTTGTAACTAGAATTGACAACTTTGGTGATGATAGTGTTCAAGTCTACTTTCCTGGTGAATGCTTGCTGATGAAAGTGTTCAGGAAGGATTTGAGAATATCTAGAGATTGGTTAGGGGACAGATGGATTAATATTAAGGCAAAGCCTGAAATAACTACAAGTCTATTCACAGCTAATGGCTTTAACACAAAGCTTTCCACGTTGCCATCTTTAGTTAAAGATGTGGACTCTGTTGGTTTTGCTAATTCGTGTCATGGTGATCCTGTTAGTAAGAAGTCTAATGAACCTTCTATCGTCGAAGCAAAATTTGTTTCTCGTGATGGCTTAACTGAAGATGGTGATTGTGCCCAGGATGGTAAAACCCCTTCAGAAAAGAGTATCCAAGCTGATGATAATATTGAAATACTTGGCAGTTGTGATAATGAAGAAACCGGTGAGGATAATGATAAGGGTAGCAATGATGATGATGACAAGAATGAGGATAGTATGGATACGGAGGAATGTGGGAACTCCAGACCAGACTGTAAAACTGTAGAACCCATGGAAGTGGCTGTATAA 2052 0.4284 MTVNNRCFVEWKEQFVSQERGNRVVHYYLKDSAGESVLAVVGTERSVRHMCYVVAEEFLEICGKEGSIPTGFKWRSRREVVDWLTSTLSKQHLQGDRSVSPGHNLLQAHEPTNGSVNEITGLSAQITDDKDCSMSNSKLSNSDIVWSGVAWTCGKQLKHYPSFCRNGIKIVIQSFVFVMGKGENHYIAYVEDMYEDRRGQKKVKVRWFHHNQEVKGVIPVRNPHPREVFITPYSQVISAECVDGPAAVLTREHYEKCMPFFSPTSTDRIHLCFRQFRSNKVKPFDLSKLRGYYTQPVLGCLHLDSVQNPESKSNSLPGEDEELSAGDDVKLGAKRSRNDKGSSQSWIGRQGVRKLIGSKEMMVYKTFQVANYASSERRLLSLKQVECQPWYNHAYKVDNKIELLCQDSGIRGCWFRCTVVQVARKQLKVQYDDVQDEDGSGNLEEWIPAFKLAMPDKLGMRHAGRPTIRPAPTYKEQELAIEVGNAVDAWWSDGWWEGVVTRIDNFGDDSVQVYFPGECLLMKVFRKDLRISRDWLGDRWINIKAKPEITTSLFTANGFNTKLSTLPSLVKDVDSVGFANSCHGDPVSKKSNEPSIVEAKFVSRDGLTEDGDCAQDGKTPSEKSIQADDNIEILGSCDNEETGEDNDKGSNDDDDKNEDSMDTEECGNSRPDCKTVEPMEVAV* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0288 683 PANTHER OS07G0607300 PROTEIN 4 658 - -
Apr2g0288 683 MobiDBLite consensus disorder prediction 641 655 - -
Apr2g0288 683 SMART BAH_4 168 287 IPR001025 GO:0003682
Apr2g0288 683 MobiDBLite consensus disorder prediction 323 337 - -
Apr2g0288 683 MobiDBLite consensus disorder prediction 607 625 - -
Apr2g0288 683 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Apr2g0288 683 SMART agenet_At_2 479 537 IPR014002 -
Apr2g0288 683 SMART agenet_At_2 393 458 IPR014002 -
Apr2g0288 683 MobiDBLite consensus disorder prediction 305 345 - -
Apr2g0288 683 Gene3D - 136 287 IPR043151 -
Apr2g0288 683 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 4 658 - -
Apr2g0288 683 MobiDBLite consensus disorder prediction 607 683 - -
Apr2g0288 683 Pfam Agenet domain 399 472 IPR008395 -
Apr2g0288 683 CDD BAH_plant_1 163 292 - -
Apr2g0288 683 Pfam BAH domain 175 260 IPR001025 GO:0003682
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0288 Apr-Chr2 3461869 3466963 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0288 407 535 PHD Transcription Factor Family AT5G58610 30.075 4.73e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0288 - - gsj:114395106 1130.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0288 2 3461869 3466963 Apr2g0288 2 3461869 3466963 ECH