Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0286 ATGGCGATTTCTTCTCTCTCTGTTCCTCCTCTTTCTCTCTCCAATTCTTCCCCCTCTCTATCTTCTAAGCTAAAGTCTCCATCTTTATGCTTTCTTTCTAGTAACACCTTAAGGGTCACAAGCCAAAAACCTCTGCATTCATCAAGTGTGGTTCATGTTGCTCCAGAAGCGTTGGATTCCCCTGAACCCTTAGACTCACCTCCAGAAATCCAAGATGATGAGTCTGAACCCGTCACCTATCAGGTTGGTGACTTGAACACAACGAGCACTTCATCGATTAGCATCGGTGCTGATGCAGATACGATGGCACCGAAGCAGAAAATTAGAATCAAGCTTAGATCTTACTGGGTGCCCTTGATAGAGGATTCCTGCAAGCAGATATTAGATGCAGCAAAGACTACCAATGCAAAAACAATGGGTCCTGTACCATTGCCAACTAAGAGGCGAGTTTACTGTGTTCTTAAGTCCCCACACGTACATAAGGATGCTCGGTTCCATTTTGAGATCAGAACTCATCAGCGGCTCATTGACATTCTATATCCTACTGCTCAAACAATAGATTCTCTGATGCAACTGGATCTTCCTGCTGGTGTTGACGTGGAGGTCAAGCTCTAA 615 0.4472 MAISSLSVPPLSLSNSSPSLSSKLKSPSLCFLSSNTLRVTSQKPLHSSSVVHVAPEALDSPEPLDSPPEIQDDESEPVTYQVGDLNTTSTSSISIGADADTMAPKQKIRIKLRSYWVPLIEDSCKQILDAAKTTNAKTMGPVPLPTKRRVYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0286 204 PANTHER BNAC05G40270D PROTEIN 1 204 - -
Apr2g0286 204 SUPERFAMILY Ribosomal protein S10 107 204 IPR036838 -
Apr2g0286 204 MobiDBLite consensus disorder prediction 1 26 - -
Apr2g0286 204 SMART Ribosomal_S10_2 109 203 IPR027486 -
Apr2g0286 204 PRINTS Ribosomal protein S10 family signature 107 120 IPR001848 GO:0003735|GO:0005840|GO:0006412
Apr2g0286 204 PRINTS Ribosomal protein S10 family signature 142 157 IPR001848 GO:0003735|GO:0005840|GO:0006412
Apr2g0286 204 PRINTS Ribosomal protein S10 family signature 163 177 IPR001848 GO:0003735|GO:0005840|GO:0006412
Apr2g0286 204 MobiDBLite consensus disorder prediction 54 77 - -
Apr2g0286 204 Pfam Ribosomal protein S10p/S20e 109 203 IPR027486 -
Apr2g0286 204 ProSitePatterns Ribosomal protein S10 signature. 131 146 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Apr2g0286 204 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 1 204 IPR001848 GO:0003735|GO:0005840|GO:0006412
Apr2g0286 204 Hamap 30S ribosomal protein S10 [rpsJ]. 105 204 IPR001848 GO:0003735|GO:0005840|GO:0006412
Apr2g0286 204 TIGRFAM rpsJ_bact: ribosomal protein uS10 106 203 IPR001848 GO:0003735|GO:0005840|GO:0006412
Apr2g0286 204 Gene3D Ribosomal protein S10 domain 96 204 IPR036838 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0286 106 204 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 32.000 9.32e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0286 K02946 - gmx:100306286 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0286 2 3447002 3450607 Apr2g0286 2 3447002 3450607 ECH