Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0273 ATGAAACCTGTTGATTGGGAGCAAGAATTGAATAAGTATCAGAATATTATGGCCTCAGGGACCAAGTCTATGAAAATAAAAGCAATGGTCATGCTGGCCCGTTTCTCCAAACATGCCCCTGAGCATGTGTTATCTTGCACCATTCCCATTCTCACTGAGATTCTTGGTGATGCTATTTCAAATGATTCCGCTCCTTCATTTCAAGAGGCTGCTGCTTATTGCTTGAAGTGTATTGCTTGTAGAGGAAATGGTCAATTGGCAATTGAAATTGCTGAACACGGTGCCGCTCATTCTTTGATGAGGTTGTTGCCTCATTCTGATGGAAGGATGAAGAAAGTCCTGATGAAGTTTTTGCTGGTTATTGTTAGTTTTTGTGAGGAAAGTAGGATAGTGGTTGCTACCAATGGTGGGGTGGAAATCATAATCAGTTTGTTGAATTCTTGCACTGATGATACTCGGTGGTATTTGTTAGAGATTTTGAGTGTGTTGGCATTGAGGAGGGATGTTAGGAAGGCGCTCGTGAGATTTGAAGCTCTTAATTTTGTTGTGGAGGCTGCTGGTGTTGGGAGCATAGTCTCTAGGGAAAGAGCTTGTCAAGCAATTGGGTTGCTTGGAGTCACGAGACAGGCTAGGCGTATGCTTGTTGAATTGGGAGCAATAGAGGCGCTTGTGGAATTGTTTCATAATGGAGATTACACCACGAAACTTTTGGTTGGTAATTCTCTTGGTGTGATATCTGCTCATGTTGATTACATTAGACCAGTTGCTCGAGCTGGGGCTATCCCACTTTATGCTGAGCTTCTTCAAGGACACGATCCTTCTGGTAAGGAGATAGCCGAGGATGTGTTTTGTATATTGGCTGTTGCAGAGACTAATGCTGTAGAAATTGCGGGGCATTTGGTGAGAATCCTTAGAGAAGGTGATGATGAAGCAAAGGCATCTGCTGTTGATGTGATGTGGGATCTGTCAGGTTACAAGCACTCTACATCTGTGGTTCGGAATTCAGGTGCAATTCCTATTCTTGTGGAGCTTTTGAGGAATGGAACTGAAGAAGTAAAGGTGAATGCTTCTAGGGTGTTTGCTCAGTTAAGTTATGATGGGGAAGACAGAATGGCATTTGCTGGTGCAGGGGCAATTCCAATTCTTATTGACTTGATGAACGATGTTGATGATGTTGACGAGGTTGAGGAACTAGGGCATAATGCTGCAGAGGCTCTTGTCAATTTTTATGAAGATCCATTGTATCATGACAGAGTATCTGATGCAATTAATGTTCCTTTGTTCAGAAACATGCAGAATAGATTAATTCTTATTCGTTCATCAAATGAGCATATGGCTAGATCCTTACGAAGGATGAGTGTTGAGCAGCTCACTCGAAACCTAGATCTTGTATAA 1395 0.4237 MKPVDWEQELNKYQNIMASGTKSMKIKAMVMLARFSKHAPEHVLSCTIPILTEILGDAISNDSAPSFQEAAAYCLKCIACRGNGQLAIEIAEHGAAHSLMRLLPHSDGRMKKVLMKFLLVIVSFCEESRIVVATNGGVEIIISLLNSCTDDTRWYLLEILSVLALRRDVRKALVRFEALNFVVEAAGVGSIVSRERACQAIGLLGVTRQARRMLVELGAIEALVELFHNGDYTTKLLVGNSLGVISAHVDYIRPVARAGAIPLYAELLQGHDPSGKEIAEDVFCILAVAETNAVEIAGHLVRILREGDDEAKASAVDVMWDLSGYKHSTSVVRNSGAIPILVELLRNGTEEVKVNASRVFAQLSYDGEDRMAFAGAGAIPILIDLMNDVDDVDEVEELGHNAAEALVNFYEDPLYHDRVSDAINVPLFRNMQNRLILIRSSNEHMARSLRRMSVEQLTRNLDLV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0273 464 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 10-LIKE 3 463 - -
Apr2g0273 464 Pfam Armadillo/beta-catenin-like repeat 329 364 IPR000225 GO:0005515
Apr2g0273 464 SMART arm_5 366 411 IPR000225 GO:0005515
Apr2g0273 464 SMART arm_5 325 365 IPR000225 GO:0005515
Apr2g0273 464 SMART arm_5 207 247 IPR000225 GO:0005515
Apr2g0273 464 SMART arm_5 248 288 IPR000225 GO:0005515
Apr2g0273 464 SMART arm_5 125 165 IPR000225 GO:0005515
Apr2g0273 464 SMART arm_5 35 80 IPR000225 GO:0005515
Apr2g0273 464 Gene3D - 5 247 IPR011989 -
Apr2g0273 464 SUPERFAMILY ARM repeat 6 419 IPR016024 -
Apr2g0273 464 Gene3D - 248 425 IPR011989 -
Apr2g0273 464 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 336 378 IPR000225 GO:0005515
Apr2g0273 464 PANTHER U BOX DOMAIN-CONTAINING 3 463 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0273 207 387 U-box Gene Family AT2G23140 29.787 2.18e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0273 - - gmx:100819735 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0273 2 3322189 3324721 Apr2g0273 2 3322189 3324721 ECH