Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0271 ATGCAAACATCTCAGAAACATGAAATTTCTTATGGCTCTGGGGGGTTCTACGTTGAGCCAGATCAAAACCTCGGGTCATATTGCTTACCATCAAGTGAGAACCTAGACAATTACTCTTCCTCCGATAACAGCAGCCAAACAACCTACCCTTCAGTTCAGACTTTAGAACAATATTGCACCATTGAATCTGCTTCAACAAGCAACAGTTTCCCTTACCAAAATTCTCCATCTGCTGTCAGTTTCTCACCTAACAATAGTCCAGTGTCAAAGCTAGATTCAAAATCCTATGTGTCAAGGCCACAGCATTCTCTTGAGATTGTTAATGATTCACCTGAGGATGATTCTTACTTGACACATGACCTTGATGACCTGAGGCATAAGATAAGAGAGCTGGAAACTGCTATGCTAGGAACTAATGCAGATATGCTAGGGACCTATGATGAGACTGTAATGCCAGGGGAATCTGATCCATTTTTGTTGGAGGCAGAGAAGTGGAAGAAAATGATGGAGGTGATATCTAGGGGGGACTTGAAAGAAATGCTTTATACTTGTGCAAAAGCAATGGCGGCAAATGATATGGAGACAACTGAAGGGCTGATGTCAGAGTTGCGAAAGATGGTGTCCATTTCAGGCAATCCAATGCAACGATTGGGAGCATACATATTGGAGGCTCTTGTTGCAAGGATGGCCTCTTCAGGAAGCACAATCTACAAGTCCTTGAAATGTAGTGAGCCTACTGGCAATGAACTACTTTCATACATGCATGTACTTTATGAAATATGCCCTTACTTCAAGTTTGGATACATGTCAGCAAATGGAGCAATTGCTGAAGCTATGAAGGAGGAAAGTGAAGTCCACATTGTTGACTTTCAGATTAGCCAGGGAACACAATGGGTGAGTCTGATCCAGGCTCTTGCTCGCCGTCCTGGAGGGCCTCCAAAGATCAGAATAACAGGTGTTGATGACAATGTTTCAGCTTATGCCCGTGGAGGGGGACTTGATATTGTTGGTAAAAGGTTATCAACACTTGCACAGTCATGTCATGTGCCCTTTGAGTTCAATGCTGTAAGGGTACCTGCTTCTCAGGTGCAACTTGAAGACCTTGAACTTCGCCCTTATGAAGCCGTGGCAGTGAATTTTGCCATTATGCTGCACCATGTACCAGATGAAAGCGTGAACAGTCACAATCATCGTGATCGGCTGTTGAGATTGGCAAAGTACTTGTCTCCTAAGGTAGTGACTCTGGTTGAGCAAGAATTTAACACCAACAACGCTCCATTCTTGCAACGTTTCATTGAGACAATGAACTACTACTTGGCTGTTTTTGAATCAATTGATATTGTGCTGCCAAGGGAGCACAAAGAGAGGATCAATGTGGAGCAGCATTGTTTGGCTAGAGAAGTTGTTAACTTAATAGCATGTGAAGGGGCAGAAAGAGTTGAAAGACATGAGCTTCTGAATAAGTGGAGAATGCGTTTCACAATGGCCGGTTTTACACCTTACCCTTTGAGCTCCTTTATTAATTCATCAATCAAGGAGCTTCTGGAGAACTACCGTGGACACTACACTCTAGAAGAGAGAGATGGTGCACTATATCTTGGTTGGATGGATAAAGTTCTTATTGCCTCTTGTGCTTGGAGATGA 1644 0.4319 MQTSQKHEISYGSGGFYVEPDQNLGSYCLPSSENLDNYSSSDNSSQTTYPSVQTLEQYCTIESASTSNSFPYQNSPSAVSFSPNNSPVSKLDSKSYVSRPQHSLEIVNDSPEDDSYLTHDLDDLRHKIRELETAMLGTNADMLGTYDETVMPGESDPFLLEAEKWKKMMEVISRGDLKEMLYTCAKAMAANDMETTEGLMSELRKMVSISGNPMQRLGAYILEALVARMASSGSTIYKSLKCSEPTGNELLSYMHVLYEICPYFKFGYMSANGAIAEAMKEESEVHIVDFQISQGTQWVSLIQALARRPGGPPKIRITGVDDNVSAYARGGGLDIVGKRLSTLAQSCHVPFEFNAVRVPASQVQLEDLELRPYEAVAVNFAIMLHHVPDESVNSHNHRDRLLRLAKYLSPKVVTLVEQEFNTNNAPFLQRFIETMNYYLAVFESIDIVLPREHKERINVEQHCLAREVVNLIACEGAERVERHELLNKWRMRFTMAGFTPYPLSSFINSSIKELLENYRGHYTLEERDGALYLGWMDKVLIASCAWR* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0271 547 Pfam GRAS domain family 177 547 IPR005202 -
Apr2g0271 547 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 546 - -
Apr2g0271 547 MobiDBLite consensus disorder prediction 28 50 - -
Apr2g0271 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 546 IPR005202 -
Apr2g0271 547 ProSiteProfiles GRAS family profile. 168 547 IPR005202 -
Apr2g0271 547 MobiDBLite consensus disorder prediction 72 95 - -
Apr2g0271 547 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0271 Apr-Chr2 3288991 3292552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0271 1 547 GRAS Transcription Factor Family AT1G50600 56.703 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr2g0271 GRAS 2e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0271 - - gmx:100785400 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0271 2 3288991 3292552 Apr2g0271 2 3288991 3292552 ECH
Apr2g0271 2 3288991 3292552 Apr9g1816 9 27023419 27027057 PCT