Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0268 ATGATGCCGAGTATTAAGCCTGATCCATCAGACAAAGATTCAGAACCATTTGTTGAGATTGATCCAACTGGAAGATATGGCAGATACAGTGAACTGTTGGGATCTGGTGCTGTGAAAAAAGTTTACAGAGCATTCGATCAAGAAGAAGGAATAGAGGTAGCTTGGAACCAAGTGAAACTAAGGAACTTCAGTGATGATCCTGCCATGGTGGATAGGCTTTACTCAGAAGTGAGATTGCTCAGAAGCTTAACCGACAAAAACATCATTTCCCTTTACAGTGTTTGGAGGGATGAGAAGCATAACACTTTGAATTTCATCACTGAGGTCTGCACAAGTGGGAATTTGAGGGAATATAGGAAGAAGCATAGGCATGTTTCCATGAAGGCTTTGAAGAAGTGGTCTAAGCAGATTTTGGAAGGGTTGAATTATTTGCATTTGCATGATCCTTGTATCATCCACAGAGATCTCAATTGCAGCAATGTGTTTGTAAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAAGAGTCACTCTGCTCATTCAATTCTTGGGACGCCTGAATTTATGGCACCTGAGTTATATGATGAGGACTACACAGAAATGGTGGACATATACTCATTTGGAATGTGTGTGTTGGAGATGGTGACACTTGAGATTCCTTATAGTGAGTGTGACAATGTTGCCAAGATATACAAAAAAGTGTCATCAGGTGTTAGACCACAGGCATTGAACAAGATTAAAGATTTTGAGGTGAAGGCCTTCATTGAGAGGTGCCTTGCGCAGCCAAGGGCTAGACCTTCTGCTGCTGAGTTGCTCAAAGACCCCTTCTTTGATGTTCTTGATAATGAAGAAAATGATGATTCTGCTAGTTCATGA 900 0.4167 MMPSIKPDPSDKDSEPFVEIDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSDDPAMVDRLYSEVRLLRSLTDKNIISLYSVWRDEKHNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKSHSAHSILGTPEFMAPELYDEDYTEMVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGVRPQALNKIKDFEVKAFIERCLAQPRARPSAAELLKDPFFDVLDNEENDDSASS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0268 299 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 296 - -
Apr2g0268 299 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Apr2g0268 299 MobiDBLite consensus disorder prediction 1 22 - -
Apr2g0268 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0268 299 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Apr2g0268 299 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Apr2g0268 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 296 - -
Apr2g0268 299 CDD STKc_WNK 25 285 - -
Apr2g0268 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0268 Apr-Chr2 3263528 3265305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0268 11 286 MAP Kinase Kinase Kinase AT5G55560 84.783 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr2g0268 Pkinase 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0268 K08867 - gmx:100782039 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0268 2 3263528 3265305 Apr2g0268 2 3263528 3265305 ECH
Apr2g0268 2 3263528 3265305 Apr9g1812 9 27000568 27002787 PCT