Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0263 ATGGCAGACATGGCAGTGTCCTTTGCACGTGACAAACTTCTTCCACTAATAAAGGATGAAGCATATCTGCTATGGAACGTTCCCAAAGAATTTGCAGATATAAAAAATGAATTAGAATACATTCAAGCCTTCCTCAAGGATGCAGATAGAAGGGCTACAACAGAAGGAGACAACACAAATGAGGGAATCAAAACATGGGTGAAACAGCTGAGGGAAGTAGCTTTTCGCATAGAAGATGTAACTGATGAATACATTATCTATGTGGAACAACAATCTCATGATCCTGGATGTGTAGCTTTACTCTGTGAGTTTGTTCACTTCATTGAAACTTTACTACAACGTCATCAAGTAGCATCTGAGATTCAAGACATCAAGTCATCCCTTAGTGGAATCAAGCAAAAAAGTGTAGAATATCACTTCCAAACTCAAACTTCTTTTGAGCAAGGATCAAGCAGCTCTGGAGGAAGCCAAGGTGCCCAATGGCTTGACCATCGAATGAATTCTCGATACCGTGATGAAGCTGAAGTGGTAGGCTTTGAAGCTCCAAAAGATGAATTGATTGGCTGGTTGCTAAAGGGACCAGAAGAACGCATTATCATTTCTGTTGTTGGAATGGGAGGACAAGGAAAAACCACTCTTGCTAGTAGAGTTTTTAACAACCAAATGGTGATTAAGCATTTTGATTACCGTGCGTGGATCACAGTGTCTCAGTCCTACAATGTGGAGGGGTTGTTGAGGGACATGTTCAAGAAGTTTTGCAAAGATAAAAGGGAAAATCCTCCAACGGGTATCTCTGAAATGGATCGAGATTCGTTGATTGAAGAAATGAGAAACTACTTGCAAAAAAAGAGGTATTTTGTTGTTTTAGATGATGTATGGGGTGTGCAACTTTGGGGTCAGATAGCAAATGCTCTTTTTGATAATAAAAGTAGAAGTAGAATATTAATCACAACTAGGAAGATGGATGTTGTAAATTCTTGTAAGTGTTCTCCTTTTGATCATGTACATGAGCTAAAACCTTTAACTCAAGAAAAATCTTTAGAACTCTTCTGGAAGAAAGCATTCCAATTTGATAGCAATGTTAAAAGTTGTCCACATGAACTCATGCATATATCTTCTGAAATTGTTAAAAAATGTAAAGGTTTACCATTAGCAATTGTGGCAATTGGTGGTCTTTTATCTCTCAGAAAAATAAACCTATTTGAATGGGAACGGTTTTGTCATAATCTAAGTTCAGAGCTGGAGAGAGATTCCCATTTGATTGGTATAACAAAAATTTTAGGTTTCAGTTATGATGACTTGCCTTACTATCTTAAATCGTGCTTATTGTATTTTGGAATATATCCTGAAGATTTTGAAGTTAGATCAAAAAGACTAACTCGACAGTGGATAGCTGAAGGGTTTGTAAAATCTGAAAAGGGAAAAACTTTGGAAGAAGTTGCAGAGCAATATTTAACAGAGTTGGTCAATAGAAGTTTGGTGCAAGTATCTTCATCTACAATTGATGGCAAAATTAGAGGTTGTCGTGTTCATGATCTGTTACGTGACATGATCCTTAAGAAATTTAAGGAATTGAATTTTTGCCAACATATTAGTGAAGATGATGAACAAGTCTCAAGTGGAATAATTCAGCGCCTAAGCTTATCAACAGCAACCAACACCAATAATTTGATGGAAAGTATTGAAAGCTCACACGTTCGTTCACTATTCTTTTTCACAGATGAAGAAATAACTGAACAATTTGAGAAGAGCATTGTCACAAATTACAAGAGGTTGAAGGTACTTGATTTTGAAGATGCTCATCAATTGTCTCATTTTCTTGGAAATTTGGAAAATTTAATCCATTTGAAGTATTTAAGCTTTAGGAAAACAGAAGTAGAGTGGGGTGTTCTTCCAGAATCCATTGGTAAGCTACAAAATCTAGAGACCTTGAATATAAGGCATACAAGAATCAAAATTATCCCAAAGGAGATTAGTAACCTTAAGAACCTAAGACACCTTTTGGGCAACAAAATGTCTTTGATTCAATTGAAGGGTGTTCTTGGAGGCATGACATCCCTACAAACACTACGTGAAGTGGAAATAGGTGATGATGGAGTGGAGCTAATTGTTGAGCTAGGAAAGCTAAGGCAACTAAGGAACTTAAACTTGGCTGGTATTAAAGAAGAACATGGTAGTGCTCTATGCTCATCATTGAATGAGATGCAACACTTGGAGAAACTAGTTATTGTTGCACAAACTACAAATGAAGTCATTGATGTGAGTTTCATTTCATCACCCCCTAAGCTTCAGAAGCTTTACTTGATATTGAAGTTAAATAAGGTGGTGCCACAGTGGGTTCTACAACTTCATAATCTTGTTGATTTGTTCTTGGGATGGTCCTATTTAACTGATGATCCATTAGAATCACTCCAAAATATGCCAAATTTGATGTACCTCAAACTCAACTATTGGGCTTATGAAGGTGAAAGTTTGAATTTTCAAAATGGGGGGTTTAAAAAATTAAAGGAACTATACTGTGGAGAACTGTCTAACTTGAATTCAATTGTCATTGACAAAGGAGCACTAAATTCGTTGAAAACGCTTAAATTCTGTTCCCTCCGTAAACTCAAGAAGGTTCCTTCAGGCATTGACCACTTAGAAAAACTTGAAGTTATCTATATATGGAGAATGTCAGCAGAATTTCAGCAGAGCATTGCTCCATATGAAAGACAAGAGCAATGGATCATCAAGCATGCTTTCTCCTTTTAA 2751 0.3664 MADMAVSFARDKLLPLIKDEAYLLWNVPKEFADIKNELEYIQAFLKDADRRATTEGDNTNEGIKTWVKQLREVAFRIEDVTDEYIIYVEQQSHDPGCVALLCEFVHFIETLLQRHQVASEIQDIKSSLSGIKQKSVEYHFQTQTSFEQGSSSSGGSQGAQWLDHRMNSRYRDEAEVVGFEAPKDELIGWLLKGPEERIIISVVGMGGQGKTTLASRVFNNQMVIKHFDYRAWITVSQSYNVEGLLRDMFKKFCKDKRENPPTGISEMDRDSLIEEMRNYLQKKRYFVVLDDVWGVQLWGQIANALFDNKSRSRILITTRKMDVVNSCKCSPFDHVHELKPLTQEKSLELFWKKAFQFDSNVKSCPHELMHISSEIVKKCKGLPLAIVAIGGLLSLRKINLFEWERFCHNLSSELERDSHLIGITKILGFSYDDLPYYLKSCLLYFGIYPEDFEVRSKRLTRQWIAEGFVKSEKGKTLEEVAEQYLTELVNRSLVQVSSSTIDGKIRGCRVHDLLRDMILKKFKELNFCQHISEDDEQVSSGIIQRLSLSTATNTNNLMESIESSHVRSLFFFTDEEITEQFEKSIVTNYKRLKVLDFEDAHQLSHFLGNLENLIHLKYLSFRKTEVEWGVLPESIGKLQNLETLNIRHTRIKIIPKEISNLKNLRHLLGNKMSLIQLKGVLGGMTSLQTLREVEIGDDGVELIVELGKLRQLRNLNLAGIKEEHGSALCSSLNEMQHLEKLVIVAQTTNEVIDVSFISSPPKLQKLYLILKLNKVVPQWVLQLHNLVDLFLGWSYLTDDPLESLQNMPNLMYLKLNYWAYEGESLNFQNGGFKKLKELYCGELSNLNSIVIDKGALNSLKTLKFCSLRKLKKVPSGIDHLEKLEVIYIWRMSAEFQQSIAPYERQEQWIIKHAFSF* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0263 916 Pfam NB-ARC domain 180 433 IPR002182 GO:0043531
Apr2g0263 916 Gene3D - 340 430 IPR042197 -
Apr2g0263 916 PRINTS Disease resistance protein signature 199 214 - -
Apr2g0263 916 PRINTS Disease resistance protein signature 279 293 - -
Apr2g0263 916 PRINTS Disease resistance protein signature 379 393 - -
Apr2g0263 916 PRINTS Disease resistance protein signature 587 603 - -
Apr2g0263 916 Gene3D - 431 522 IPR036388 -
Apr2g0263 916 PANTHER DISEASE RESISTANCE PROTEIN RP 30 895 IPR044974 GO:0006952
Apr2g0263 916 Pfam Rx N-terminal domain 5 95 IPR041118 -
Apr2g0263 916 PANTHER - 30 895 - -
Apr2g0263 916 Gene3D - 4 118 - -
Apr2g0263 916 CDD RX-CC_like 2 132 IPR038005 -
Apr2g0263 916 SUPERFAMILY L domain-like 509 892 - -
Apr2g0263 916 Gene3D - 163 331 IPR027417 -
Apr2g0263 916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 445 IPR027417 -
Apr2g0263 916 Gene3D Ribonuclease Inhibitor 546 902 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0263 Apr-Chr2 3208994 3211744 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0263 172 383 WRKY Transcription Factor Family AT4G12020 28.829 3.16e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0263 K13457 - gmx:100819372 1090.49