Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0261 ATGGCGGAAATGGCTGTGTCTCTTGCTGTTGATCATCTGCTTCCACTGCTAAAGGGAGAAGCCAATCTGCTCAAAGGCATTCACAAAGAATTTGCAGACATAAAAGATGAACTTGAAAGCATCCAAGCCTTTCTCAAGGACGCAGATAGAAGGGCAGTGGCAGAAGGAGAAAACACAGATGAAGGAGTCAAAACATGGGTGAAGCAGGCGAGAGAAGCAGCTTTTCGGATAGAAGATATCATTGATGAATATCTTATCTACGTTGGAAAGAAACCTCATGATCCCGGATGTGTAGTCTCACTCAACAAGATTGCTCACTTGATCAAAACTCTGATTCCTCGTCACCGAATAGCATCTGAGATTCGGGATATTAAGTCACATGTCCGAGGAATCAGGGAAAGAAGTGAAACATATTCTTTCGAACGAGGATCAAGTAGTTCTGGAGGAAGCCAAAATGTAAAATGGCATGACCCCCGAATCGCCTCCCTCTTTGTTGAGGAGGCTGAGCTTGTGGGCTTTGAAAAACCAAGAGATAAATTGATTGGTTTGTTGGTAGAAGGTCCAGAAGAACGCACTGTCATCTCTGTGGTAGGAATGGGAGGACAGGGTAAGACCACTCTTGCAAACAGAGTTTTCAACAACCCGAAGGTGACTTGCCACTTCGATTTTCAAGCATGGATCACAGTATCTCAGTCCTACAGTGTGGATGAGTTGCTGAGGAACCTGTTGCAAAAGCTTGGCACAGAAAAAGAGGAGACTATTGAAATGGATCAAGAAGCATTGATTAAAGAAACGAGAAACTGCTTGCAACAGAAGAGGTATGTTGTCGTGTTTGATGATGTATGGAATCCACATTTTTGGGATGTTATTCAATTCGCTCTATTGGATAATAAAAATGGAAGTAGGATACTTATTACAACTAGGAAAGAAGATGTTGCAATGTCTTGTAAGAAATTTTCTTCTGTTCATGTGCACATGTTGGAACCTTTATCTCATGAAAAATCTTTGGAGCTATTCTATAAGAAGACATTTCAACATGATTTCAATGGACGTTGTCCAGATGATTTGGTGGAAATATCTTGTGAAATCGTTGAAAAATGTAAGGGCTTGCCACTAGCAATTGTGTGCATTGGTGGTCTTTTATGTTCCAAAGGAATATCTACTGCACTTGAATGGAAAAGGTTTTGTAATAATCTAAGTTCAGAGTTGGGGAATAATTCCAGTATAAATAAAATTTTAGGCTTTAGTTATGATGATTTGCCCTACTATCTTAAGCCATGCTTGCTGTATTTCGGAATGTATCCTGAAGACTATGCAGTTAGATCGAAAAGACTCATTCGACAGTGGATAGCTGAAGGGTTTGTAAAATATGAAAAGGGGAAAACCTTGGAAGAAGTTGGACAGCAATATTTAAGAGAGTTGGTTGGTCGAAGTTTGGTGCAAGCACGTTCATTTACCATTGATGGAAAAGTTAGTGTTTGTCAAGTTCATGACTTGACCCGGGAGATGATCCTTGAAAAATGTAAGTATTTAAGATTTTGTGAGTATATTGGTGAAGACAGTGAGCTAGTGTCAAGTGGAGGTATAACTCGGCGCCAATCACTTAAAACCACATCTTATGTTTCCATGGAAAATATTGAGGGCTCACATGTTCGGACACTGTTTTTCTTCTTCAGTGATATAAAGCCTATTTTCTCAACCAGCTGGGTGGAAGAACTCCCCAAGAAATACAAGCTATTGAAGGTACTTCATTTTGAAACGGCTTACAAGTGGTTTTTCTTTCCCAAAAGTTTGGGAAATTTCATGCACCTTAAGTATTTAAGCTTCGAGTATTTACCCATTGATAGTCTTCCAAAATCCATTGGTAACCTCCAGAACCTAGAGAGCTTGAATATAAGCGGTACACTCATCAGAATCTTGCCAAAGGAAATCTACAAGCTTAGAAAGCTAAGATATCTTTCGGGAACCCTGCTGAAATTGATTCAAATGAAGGATGGCATTGAAGGAATGACTTCCCTCCAAACATTGAAGAAGGTGAGTATAACCTATGATGATAGATTTGAGCTAATTACTAGAGAGCTAGAAAAGCTGAGGCAGTTAAGGAGCTTAAGCCTGATTGATATTGCCACAGAACATGAAAACGCTCTTTGTTCCTTACTAAATCAGATGCAACACTTGGAGGAACTATGTATTGGTTTTGGTTTGTTTTTTGGTGGTGTTATTGATTTGAGTTTGGTTTCATCCCCTCCTAAGTTTCTTTGGAAGCTTCGCCTTGAACTGAAGTTGAATAAGTTGCCAGAATGGGTTCAAGAGCTGCCAAATCTTGCAAAATTAACCTTGCGTTGGTGCGAGTTAATTGAAGATCCACTGAAATCATTAAAAAATCTTCAAAATTTGATGTACCTCGATATTGGATTCGAAGCTTATGTAGGTGAAAGTTTGCATTTTCAAGGAGAGTTTCAGAACCTAAAGGAACTAAACCTAAGTCGTTTAGATAACTTGAATTCCATTGTCATAGAGAAAGGAGCAATGAGTTCTTTGGAAAGGCTAACCTTTTATAGTCTTTTCTTACTCAAGACCGTACCCATTGGCATTCACAACTTAGAGAAACTTCAAGTTTTCCAAGTGGAGGGGGAGATGTCAGCTGAATTTTTGGACAACATTGCTCCTGATGGAGGACAAGATCGCTGGATCATACAGCATGTGCCCTATGTAAGCATTGATGCTCAGGTTATGGAAACCAAACCTTAG 2751 0.3955 MAEMAVSLAVDHLLPLLKGEANLLKGIHKEFADIKDELESIQAFLKDADRRAVAEGENTDEGVKTWVKQAREAAFRIEDIIDEYLIYVGKKPHDPGCVVSLNKIAHLIKTLIPRHRIASEIRDIKSHVRGIRERSETYSFERGSSSSGGSQNVKWHDPRIASLFVEEAELVGFEKPRDKLIGLLVEGPEERTVISVVGMGGQGKTTLANRVFNNPKVTCHFDFQAWITVSQSYSVDELLRNLLQKLGTEKEETIEMDQEALIKETRNCLQQKRYVVVFDDVWNPHFWDVIQFALLDNKNGSRILITTRKEDVAMSCKKFSSVHVHMLEPLSHEKSLELFYKKTFQHDFNGRCPDDLVEISCEIVEKCKGLPLAIVCIGGLLCSKGISTALEWKRFCNNLSSELGNNSSINKILGFSYDDLPYYLKPCLLYFGMYPEDYAVRSKRLIRQWIAEGFVKYEKGKTLEEVGQQYLRELVGRSLVQARSFTIDGKVSVCQVHDLTREMILEKCKYLRFCEYIGEDSELVSSGGITRRQSLKTTSYVSMENIEGSHVRTLFFFFSDIKPIFSTSWVEELPKKYKLLKVLHFETAYKWFFFPKSLGNFMHLKYLSFEYLPIDSLPKSIGNLQNLESLNISGTLIRILPKEIYKLRKLRYLSGTLLKLIQMKDGIEGMTSLQTLKKVSITYDDRFELITRELEKLRQLRSLSLIDIATEHENALCSLLNQMQHLEELCIGFGLFFGGVIDLSLVSSPPKFLWKLRLELKLNKLPEWVQELPNLAKLTLRWCELIEDPLKSLKNLQNLMYLDIGFEAYVGESLHFQGEFQNLKELNLSRLDNLNSIVIEKGAMSSLERLTFYSLFLLKTVPIGIHNLEKLQVFQVEGEMSAEFLDNIAPDGGQDRWIIQHVPYVSIDAQVMETKP* 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0261 916 Gene3D - 161 324 IPR027417 -
Apr2g0261 916 Gene3D Ribonuclease Inhibitor 742 888 IPR032675 -
Apr2g0261 916 Gene3D Ribonuclease Inhibitor 575 741 IPR032675 -
Apr2g0261 916 PANTHER DISEASE RESISTANCE PROTEIN RP 23 877 IPR044974 GO:0006952
Apr2g0261 916 CDD RX-CC_like 2 133 IPR038005 -
Apr2g0261 916 SUPERFAMILY L domain-like 496 877 - -
Apr2g0261 916 PRINTS Disease resistance protein signature 193 208 - -
Apr2g0261 916 PRINTS Disease resistance protein signature 268 282 - -
Apr2g0261 916 PRINTS Disease resistance protein signature 367 381 - -
Apr2g0261 916 PRINTS Disease resistance protein signature 818 834 - -
Apr2g0261 916 Pfam Rx N-terminal domain 5 94 IPR041118 -
Apr2g0261 916 Pfam NB-ARC domain 174 418 IPR002182 GO:0043531
Apr2g0261 916 Gene3D - 4 118 - -
Apr2g0261 916 PANTHER - 23 877 - -
Apr2g0261 916 Gene3D - 417 508 IPR036388 -
Apr2g0261 916 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 431 IPR027417 -
Apr2g0261 916 Gene3D - 329 416 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0261 Apr-Chr2 3183537 3188752 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0261 165 804 WRKY Transcription Factor Family AT4G12020 22.979 2.45e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0261 K13457 - gmx:100789363 907.131