Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0260 ATGGCAGAAAAAGGGGTGTCCTTTGCTCGTGATCGCTTGATTCCATTCTTTACAGAAGCAGCCTACATGATCAGGGGTGTACCATATGAAGTTTCGGACTTGAATAATGAACTAGAAATGATTCAAGCCTTCGTTCAAGATGCAGATAGAATGATTGAAGCTGAAGAAGACAGCAGAAATGAAGAAATCAAAAGAAGGTTGAGGGTGTTAATAGAAGAATCTTTTCACTTGGAAGATGTCATTGATGAGTATATGATCTATGAGAAGCAACAACCTTGGAATCCTGGATGTGCAGCGGTAGCTTGTGAGCCAATTAAATTCATCAAAACTATGATCTTTCGTCTTCAAATGTCATATAAGATTCGAGACATGAAATCACACCTTCGTGCAATCAATGAAAGCAGTTCATGTGATCATGGCTTCAAAATCTCAGCTTATGTAGATCAAGGACAGTGCAGTTCAGGAGAAAACCGAAACAATCCATGGCAGAGGCTTAGAGTAGCTCCTCTTTACATGAATGAAGATGAAATTGTGGGCTTTGAAGCCCCTAAAAAAGAATTGATTGATTTGTTGGTAAAGGGTTGGGCAGAGAGAACTGTCATATGTGTGGTAGGAATGGGAGGGTTAGGAAAAACCACTCTTGCCAAAAGTGTTTTTGACAACAAGGTGGTGGTTGAGAACTTCGAGTGTGCCGCATGGATCACAGTGTCTCAGTCCTACACTGAAGAAGGATTGTTGAAGGACATGTTGCTAAGATTTTGCAAGCGAAGCAATGAGGCTCTTAGGAATATTTCTACACTGGAACGAGGTTTATTGATAGAGGAATTGAGAAATTACTTGCGTCGAAAGAGGTACGTTGTCTTCTTTGATGATGTATGGGATCCATATTTTTGGAATGTGATTGAATTTGCTGCACTTGATAATTCTCTAGGAAGTAGGATATTAATCACAACTAGGAACGTGGATGTTGCAATGTCATGCCAGAGCTCTTCTTTTGTTCATATTCATGAGTTGAAGCCGCTATCTCGAAAAGAGTCTTTGAGGCTCTTCCACAAGAAGGCATTTCAATTTGAACCTAATGGATGTTGTCCAACAGAACTCGAGGGCATATCCTCTGAAATTGTTGCAAAATGTGAGGATAATCCACTAGTGATTGTGTCAGTTGCTGGTCTTTTATCTTGCAAAGCCAAAGATGATTTTGAACACTTTAGTCAAAATCTAAGTTCAGAGCTTAAGAAGAATTCCTTTTTCAGTGGCATAACAAAAATTATCAGTTTAAGTTATGATGATTTGCCTCACTATCTCAAATCGTGCTTTTTGTATTTTGGAATGTATCCTGGTGACTATGAAGTTGAATCAAATAGAATAATTTGGCAATGGATAGCTGAAGGGTTTGTGAAACCTGAGGCTGGAAAAACTTTAGAGGAAGTTGCAAAACATTATTTAACTGAGTTGGTTAACAGAAGTTTGGTGCAAGTGTCTTCTTTTGCCACTGATGGTAAAGTTAAAGTTTGTCATATTCATAACCTAATACGTGAAATGATCCTTATAAAATTTAAGGATTTAAGATTCTGCCAATATATTAGTGACGAAATTGATCAATCTGTCTTAAGTGGTAGGATAACCCGGCGCCTATCGTTAGCAACCAGTTCCTATGATTTAATTGGAAGTATTGAAAGCTCACATGTTCGTTCACTTCTTTTCTTCACCAATGAAGAATTACATGAATACTTTGTGAGGGAAATCATTACAAAATATAGGCTATTGAAGGTGCTTGATTTTGAAAATGCTCGATTGTATTGTGTTCCTGATAATTTGGGAAATCTACACCAGTTGAAGTATTTAAGCTTCAGGAATACACGAGTAGAAAGTCTTCCAAAATCCATTGGTATGCTCCAAAACTTGGAGACCTTGGATCTAAGGCAAACAGGTGTACATGAGATGCCAAAGGAGATTAGCAAACTTAAAAAGCTACAACATCTTTTGGCTAACAGAATGTCCTTGATTCTGTTGAGGGATTGCATTGGAGGCATGACATCCCTACAAACTTTGCATGAAGTGAGAATAGATCATGATGGAGTGGATTTAATCAGAGTTAGGAATGCTTTTGGCGTTGAGGAAGTTGGGCTTGACTAA 2136 0.382 MAEKGVSFARDRLIPFFTEAAYMIRGVPYEVSDLNNELEMIQAFVQDADRMIEAEEDSRNEEIKRRLRVLIEESFHLEDVIDEYMIYEKQQPWNPGCAAVACEPIKFIKTMIFRLQMSYKIRDMKSHLRAINESSSCDHGFKISAYVDQGQCSSGENRNNPWQRLRVAPLYMNEDEIVGFEAPKKELIDLLVKGWAERTVICVVGMGGLGKTTLAKSVFDNKVVVENFECAAWITVSQSYTEEGLLKDMLLRFCKRSNEALRNISTLERGLLIEELRNYLRRKRYVVFFDDVWDPYFWNVIEFAALDNSLGSRILITTRNVDVAMSCQSSSFVHIHELKPLSRKESLRLFHKKAFQFEPNGCCPTELEGISSEIVAKCEDNPLVIVSVAGLLSCKAKDDFEHFSQNLSSELKKNSFFSGITKIISLSYDDLPHYLKSCFLYFGMYPGDYEVESNRIIWQWIAEGFVKPEAGKTLEEVAKHYLTELVNRSLVQVSSFATDGKVKVCHIHNLIREMILIKFKDLRFCQYISDEIDQSVLSGRITRRLSLATSSYDLIGSIESSHVRSLLFFTNEELHEYFVREIITKYRLLKVLDFENARLYCVPDNLGNLHQLKYLSFRNTRVESLPKSIGMLQNLETLDLRQTGVHEMPKEISKLKKLQHLLANRMSLILLRDCIGGMTSLQTLHEVRIDHDGVDLIRVRNAFGVEEVGLD* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0260 711 Gene3D - 428 517 IPR036388 -
Apr2g0260 711 PANTHER DISEASE RESISTANCE PROTEIN RP 30 691 IPR044974 GO:0006952
Apr2g0260 711 Pfam NB-ARC domain 182 429 IPR002182 GO:0043531
Apr2g0260 711 Pfam Rx N-terminal domain 6 92 IPR041118 -
Apr2g0260 711 Gene3D Ribonuclease Inhibitor 555 696 IPR032675 -
Apr2g0260 711 CDD RX-CC_like 2 133 IPR038005 -
Apr2g0260 711 Gene3D - 5 131 - -
Apr2g0260 711 PANTHER - 30 691 - -
Apr2g0260 711 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 442 IPR027417 -
Apr2g0260 711 Gene3D - 167 334 IPR027417 -
Apr2g0260 711 PRINTS Disease resistance protein signature 200 215 - -
Apr2g0260 711 PRINTS Disease resistance protein signature 279 293 - -
Apr2g0260 711 PRINTS Disease resistance protein signature 378 392 - -
Apr2g0260 711 PRINTS Disease resistance protein signature 630 646 - -
Apr2g0260 711 SUPERFAMILY L domain-like 508 685 - -
Apr2g0260 711 Gene3D - 340 427 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0260 Apr-Chr2 3168715 3170850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0260 177 385 WRKY Transcription Factor Family AT4G12020 28.251 8.15e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0260 K13457 - gmx:100819372 691.419