Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0259 ATGCAGGAGTTAGGGAAACATACAGTGTCATGCCTCTCTGATTTGGTTATCAAAGTAGCTGACACAATCCGCAGTGTCCCAAAAGAAATTCAGAGCATTAAAGGTGATCTAAATCGCATTCAAGCCTCTATAGTAACTGCAGCTAAAGAAGACCAAGATGTGATGAAGGAGATGAAAGAAACTGTTTTCAGCATAGAAGACATCATTGATGACTATGAGAGTTCTAGAGGATGGGAGTTTCATGATTTTGGATGTACAACTTTGCCACATGAGACTGCAGACTTGGTGAAATCTATGATGATTCATTTGGAAATAGCATGGAAGATTAAGAGTGTTAAGTCACAAGTTGAAAAGATTGAGGCAGCACAAGCAAGAAAGAAAGCAGAAGCTGCATCCAAAATCAAGCCTTCTTTGGAGCAAACAACAAGCCATTACAAAGGAAACACAGACCTCTCATGGAAGAATCTTAGGGAGCTTCCTCTTCACATGGAAGCAACTGAAATTGTAGGCTTGGAAGACCATTTTATGAAATTTTGTGACTGGTTGGAAGATAAACAACCAAAGTGTACTGTCATCACTGTGGTAGGAATGGGAGGGTCGGGAAAAACCACTCTTGCTAGGAAAGTCTTTTATAACTGTGAGGAGACTAGGAGCTTTGAGTGTGAAGCATGGATCACGGTGTCGAAGTTTTCCGACAGAGAAGAAATGTTGAAGGATATGTTGAGGCAGTTTAATAAACGAAAGCCTCGTGGAGAAATGTCAAGGGAAGAGTACTTGAAGAAAACGAGGTATGTTGTTTTCTTTGATGATGTGTGGAGAGAACAATTTTGGGAGGAAATTAAATTTTCTCTAGAGAATAAAAACCCTGGAAGCATGATAATTATCACAAGCAGGAATAAGAAAGTTGTGAACACTTGTATGAGATCTTGTTCTGGTACAGTTGAAGTGCTTGAAATGGAACCTTTAACCAGAGATGAATCTTTGAAGCTGTTCCATAAAACGGCATTCCTAAATGACCCTGAGGGTCCAGAGAGACACAGGGATATATCTTGTATGATTGTTGAAAAATGCGTGCATTCACCACTAGGAATTTTGGCCATTGGTCGCGAAGTTGCTGCTGATAGAAAATTTCCATTGGAATGGGAAAGGCATATTAAAAAAAATGCAGACATGACAAAAATACTAAAACTAAGTTATGATGATTTGCCTGAATATCTTAAACCATGTTTCTTGTATTTTGGAATGTATCCTGAAGATCATGAAGTAAGATCGGAGAGATTAATTCGGCAGTGGATAGCAGAAGGGTTTATAATATCTGAGAAGAGGAAAACGTTGGAGGAAGTAGCCAAAGAGTATTTACAAGAGTTGATTGATAGAAGTTTGGTGCAGGTGTCTTCATTCAACATTGATGGCAAAGCTAAAAGTTGTAGCATTCATTACCTTGTACGTTCTATGATCCATAGAATATTCGAGGATTTAAGTTTTTGCCAGTTCATTGGTGAAGATAGCAGGTTAGACAAGGAGGATATAATTCGGCGCCTATCAATAGCAATCAGTTCAGGAGGAGGATTAGATGTATTAACAAACTCTGCTTCATCTACTGATTCAAAGGAAAGGATTGTATATTCATTCATGAGGTCCTTGTTGCTTTTCACCAAAAAAGAATTAGATGTTTCTGAATACACAAGGAGAATCTTTATGAAATGCACACAATTGAAAGTACTTGACTTTGAAAATTCTCTGTTGCGTGATGTTCCTGACATTATTGGAAATTCAATCAAATTGAAGTATTTAAGTTTCAGGAATACTAATGTAAGAAGTCTTCCATATTCCATTGCAAAGCTGGAGAACCTTGAGACTTTGGATCTAAGGCAAACACAAGTGAAAATGATACCCAATGAGGTTAGCAAGCTTAGAAAGCTACGACATCTTTTAGGGGATGATATATCTTTGATTCAATTGAATGATGGTATTGCAGACATGAAATTCCTACAAACACTATATAGCATAAAAATAGATGATGATGGTGATGGATTGAAGCTAATTGAAAAGCTAGGAAAGCTAGAGCAAATAAGGCATTTGGGATTGAGTAATGTTATGAAAGAACACGGAAGCGCAATATGTTCCTCGTTGAATAAAATGCAAGACTTGGAGAAGCTACACATTGTTGCAAAGGATGAAAATGAAATTGATTTACAAAGTATGGAAAAGCGATCTAATCTTCGAAAGCTACACCTGCAAGGGAAGTTAAGTAGAGTACCAGAATGGATTCGAGAGCTTCAAAATTTTCATCAGTTGGTCTTGTCCATGTCCAAGTTAGCTAATGATCCGTTGCTTTTGCTGACAAATATTTTAAATTTGAGGTCCCTCTCGATTATCCATGAAGGTTATGAAGGTGCATGCTTGCATTTTCATGATGGAGGATTTCGCTATCTAGAGGAGCTAGAACTTGGATCTTTACATAGCTTGAAGTCCATCACTATTGACAGCAAATCACTGCCATCACTGAAAAAGATCAAGTTAAGGGATATCCCTCAATTGAAGGAGGTACCCTCTGGCATCAAACATTTGAAGAATCTTGAAGATCTCAATATTGAAAAAATGAAAGCTGAATTTGAGAGTATGATTGGTGATTACTTGAGACAAGAGCACTCTATCATCCAACATGTGCTCCGTGTAATAGTTAATGGCAAGCTTGTTAAGGATGAGAAACCTCAGAAATAA 2724 0.3767 MQELGKHTVSCLSDLVIKVADTIRSVPKEIQSIKGDLNRIQASIVTAAKEDQDVMKEMKETVFSIEDIIDDYESSRGWEFHDFGCTTLPHETADLVKSMMIHLEIAWKIKSVKSQVEKIEAAQARKKAEAASKIKPSLEQTTSHYKGNTDLSWKNLRELPLHMEATEIVGLEDHFMKFCDWLEDKQPKCTVITVVGMGGSGKTTLARKVFYNCEETRSFECEAWITVSKFSDREEMLKDMLRQFNKRKPRGEMSREEYLKKTRYVVFFDDVWREQFWEEIKFSLENKNPGSMIIITSRNKKVVNTCMRSCSGTVEVLEMEPLTRDESLKLFHKTAFLNDPEGPERHRDISCMIVEKCVHSPLGILAIGREVAADRKFPLEWERHIKKNADMTKILKLSYDDLPEYLKPCFLYFGMYPEDHEVRSERLIRQWIAEGFIISEKRKTLEEVAKEYLQELIDRSLVQVSSFNIDGKAKSCSIHYLVRSMIHRIFEDLSFCQFIGEDSRLDKEDIIRRLSIAISSGGGLDVLTNSASSTDSKERIVYSFMRSLLLFTKKELDVSEYTRRIFMKCTQLKVLDFENSLLRDVPDIIGNSIKLKYLSFRNTNVRSLPYSIAKLENLETLDLRQTQVKMIPNEVSKLRKLRHLLGDDISLIQLNDGIADMKFLQTLYSIKIDDDGDGLKLIEKLGKLEQIRHLGLSNVMKEHGSAICSSLNKMQDLEKLHIVAKDENEIDLQSMEKRSNLRKLHLQGKLSRVPEWIRELQNFHQLVLSMSKLANDPLLLLTNILNLRSLSIIHEGYEGACLHFHDGGFRYLEELELGSLHSLKSITIDSKSLPSLKKIKLRDIPQLKEVPSGIKHLKNLEDLNIEKMKAEFESMIGDYLRQEHSIIQHVLRVIVNGKLVKDEKPQK* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0259 907 PANTHER - 31 872 - -
Apr2g0259 907 PRINTS Disease resistance protein signature 191 206 - -
Apr2g0259 907 PRINTS Disease resistance protein signature 258 272 - -
Apr2g0259 907 PRINTS Disease resistance protein signature 357 371 - -
Apr2g0259 907 PRINTS Disease resistance protein signature 613 629 - -
Apr2g0259 907 SUPERFAMILY L domain-like 556 869 - -
Apr2g0259 907 Gene3D - 321 398 IPR042197 -
Apr2g0259 907 Gene3D - 6 106 - -
Apr2g0259 907 Gene3D - 154 311 IPR027417 -
Apr2g0259 907 CDD RX-CC_like 12 119 IPR038005 -
Apr2g0259 907 PANTHER DISEASE RESISTANCE PROTEIN RP 31 872 IPR044974 GO:0006952
Apr2g0259 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 413 IPR027417 -
Apr2g0259 907 Gene3D Ribonuclease Inhibitor 542 885 IPR032675 -
Apr2g0259 907 Pfam NB-ARC domain 172 407 IPR002182 GO:0043531
Apr2g0259 907 Gene3D - 399 488 IPR036388 -
Apr2g0259 907 Coils Coil 109 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0259 Apr-Chr2 3154138 3157734 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0259 184 482 WRKY Transcription Factor Family AT5G45050 25.749 3.84e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0259 K13457 - gmx:100789363 608.601