Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0258 ATGGCAGAAAAAGGGGCGTCCTTTGCTCGTGATCGCTTGATTCCATTATTTACAGAAGCAGCCTACATGATCAGGGGTGTCCCATATGAAGTTTCGGACATGAAAAATGAACTAAAAAAAATTCAAGCCTTCATTCAACACGCAGATAGAATGATTGAAGCTGAAGAAGACACCAAAAATGAAGAAATCAAAAGAAGGTTGAGGGTGTTAATAGAAGGATCTTTTCACTTGGAAGATGTCATTGATGAATATATGATCTATGAGGAGCAACAACCTTGGAATCCTGGATGTGCAGCTGTAGCTTTTGAGCCGATTAACTTCATCAAAACTATGATCTTTCGTCTTCACATGTCATATAAGATTCGAGACATGAACTCACATGTTCGTGCAATCAAAGAAAGCAGTTCATGTGATCATGGCTTCAAAACCTCAGCTCATGTAGATCAAGCAGAGTGCAGTTCAGTAGAAATGGATGCAGCAGCTCATATTTGCGTAGATGTAGTTAAAATGGTGGACTGCTGCGAAGTCCCTGAAAAGGAATTGATTGTGGGCAGTTCAGGAGAAAGCCAAAACAATCCATGGCAGACGCCTAAACAAGCTTCTCTTTACATGGATGAAGATGAAATTGTGGGCTTGGAAGCCCCTACAAAAGAATTGATTGTGGGCAGTTCAGTAGAAAACCAAAGCATTCCATGGCAGACGCTTAGAAAAGCTCCTCTTTACATGGATGAAGATGTAACTGTGGACTTTGAAGTTCATGAAATTGTGGGCAGTTCAGTAGAAAACCAAAGCATTCCATGGCAGACGCTTAGAAAAGCTCCTCTTTACATGGATGAAGATGTAACTGTGGACTTTGAAGTTCATGAAATTGTGGGCAGTTCAGGAGAAAACCAAAACAATCCATGGAAGACGCCTAGAGAAGCTCCTCTTTACATGGATGAAGATGAAATTGTGGGCTTTGAAGCCCCTAAAAAAGAATTGATTGATTTGTTGGTAAAGGGCAGGGCAGAGAGAACTGTCATATGTGTGGTAGGAATGGGAGGGTTAGGAAAAACCACTCTTGCCAAAAGTGTTTTTGACAACAAGAAGGTGGTTGAGTACTTCGATTGTGCCGCATGGATCACAGTGTCTCAGTCCTACACTGCAGAAGGATTGTTGAGGGACATGTTGCTAAGCTTTTGCAAGCGAAGCAATGAGGCTCTTCTTAGGAATATTTCTACACTGGATCGAAGTTCATTGATCTTTGAATTGAGAAATTACTTGCGTCGAAAGAGGTATGTTGTCTTCTTTGATTATGTATGGGATCCATGTTTTTGGGATGTGATTGAATTTTCTGCACTTGATAATTGTCTAGGAAGTAGGATATTAGTCACAACTAGGAACATGGATGTTGCAATGTCATGCAAGAGATCTTCTTTTGTTCACATTCATGAGTTGAAGACACTATCTCCAAAAGAGTCTTTGAGGCTCTTCCACAAGAAGGCATTTCAATTTGAACCTAATGGATGTGGTCCACCAGAGCTCGAGGGCATATCGTCTGAAATTGTTGCAAAATGTGAGGGTAATCCACTAGTGATTGTGTCAGTTGCTGGTCTTTTATCTTGCAAAGCCAAAGATGATTTTGAACAGTTTAGTCAAAATCTAAGTTCAGAGCTTGAGAAGAATTCCTTTTTCAGTTGTATAACAAAAATTATCAGTTTAAGTTATGATGATTTGCCTCACTATCTCAAATCGTGCTTTTTGTATTTTGGAATGTATCCTGGCGACTATGAAGTTGAATCAAATAGAATAATTTGGCAATGGATAGCTGAAGGGTTTGTAAAATCTGAGGAGGGAAAAACTTTAGAGGAAGTTGCAGAACATTATTTAACTGAGTTGGTTAATAGAAGTTTGGTGCAAGTGTCTTCTTTTGCCACTGATGGTGAAGTTAAAGTTTGTCATATTCATAACCTACTACGTGAAATGATCCTTATAAAATTTAAGGATTTAAGATTCTGCCAATATATTGACGATATTGATCAATCTGTCTTAAGTGGTGGGATAACTCGGCGCCTATCAATAGCAACCAGTTCCTATGATTCAATTGGAAGTATTGAAAGCTCACATGTTCGTTCACTTCTTTTCTTCACCAGTGAAGAATTACATGAATACTTGTTGAGGAAAATCATTACAAAATATAGGCTGTTGAAGGTGCTTGATTTTGAAAATGCTCGATTGTATTGTGTTCCTGATAATTTGGGAAATTTACTCCACTTGAAGTATTTAAGCTTCAGGAATACACGAGTAGAAAGTCTTCCAAAATCCATTGGTTTGCTCCAAAACTTGGAGACCTTGGATCTAAGGCAAACAGGTGTACATGAGATGCCAAAGGAGATAAGCAAACTTCAAAATCTACAACATCTTTTGGCTAACAGAATGTCCTTGATTCTGTTGAGGGATTGCATTGGAGACATGACATCCCTACAAACTCTACATGAAGTTAGAATAGATCATGATGGAGTGGATTTAATCAGAGAGTTAGGAATGCTTTTGGAGTTGAGGAAGTTGGGCTTGACTAATGTTGGGAAAGAACATGGAAGCACTATATGTTCTTCAATAAATAACATGCATCGGTTGGAAAAACTATATATTTCTACAGAAGATGATAATGATGTCATTGATTTGGATTTCCATTCATCCCCACATAAGCTTCATAAGCTTCACCTACATGGGAAGTTAAAAAAGTTTCCAGAGTGGATTCAAGGCCTCAACAATCTTCACTTGATCTTGTCTAGATCAAAGTTGACTAATGATTCATTGAAGTTTCTAGAAAGAGTGCCAAATTTGTTGATCCTATCTATTGTCCATGAAGGTTATGAAGGCAAAAGTTTACAATTTCGAGCTGGAGAATTTCAAAGACTAAAGGAACTTCAACTCGAATCTTTGCAGAGCTTAAGTTCCATCTCTATTGACGAAGGAGCACTGCAGTCTCTCAAAAAGCTTGGGTTGAAGAATATCCCCAAACTGAAGATGGAACCTTCTGACATTTATCACTTAAAGAAACTTGAAGTTCTCAATATTCAGGATATGCCAATTGAATTTGAGCAGAACATTGTTGCCAATGTGCCCTTCGCAAGAATTATTTAG 3126 0.3842 MAEKGASFARDRLIPLFTEAAYMIRGVPYEVSDMKNELKKIQAFIQHADRMIEAEEDTKNEEIKRRLRVLIEGSFHLEDVIDEYMIYEEQQPWNPGCAAVAFEPINFIKTMIFRLHMSYKIRDMNSHVRAIKESSSCDHGFKTSAHVDQAECSSVEMDAAAHICVDVVKMVDCCEVPEKELIVGSSGESQNNPWQTPKQASLYMDEDEIVGLEAPTKELIVGSSVENQSIPWQTLRKAPLYMDEDVTVDFEVHEIVGSSVENQSIPWQTLRKAPLYMDEDVTVDFEVHEIVGSSGENQNNPWKTPREAPLYMDEDEIVGFEAPKKELIDLLVKGRAERTVICVVGMGGLGKTTLAKSVFDNKKVVEYFDCAAWITVSQSYTAEGLLRDMLLSFCKRSNEALLRNISTLDRSSLIFELRNYLRRKRYVVFFDYVWDPCFWDVIEFSALDNCLGSRILVTTRNMDVAMSCKRSSFVHIHELKTLSPKESLRLFHKKAFQFEPNGCGPPELEGISSEIVAKCEGNPLVIVSVAGLLSCKAKDDFEQFSQNLSSELEKNSFFSCITKIISLSYDDLPHYLKSCFLYFGMYPGDYEVESNRIIWQWIAEGFVKSEEGKTLEEVAEHYLTELVNRSLVQVSSFATDGEVKVCHIHNLLREMILIKFKDLRFCQYIDDIDQSVLSGGITRRLSIATSSYDSIGSIESSHVRSLLFFTSEELHEYLLRKIITKYRLLKVLDFENARLYCVPDNLGNLLHLKYLSFRNTRVESLPKSIGLLQNLETLDLRQTGVHEMPKEISKLQNLQHLLANRMSLILLRDCIGDMTSLQTLHEVRIDHDGVDLIRELGMLLELRKLGLTNVGKEHGSTICSSINNMHRLEKLYISTEDDNDVIDLDFHSSPHKLHKLHLHGKLKKFPEWIQGLNNLHLILSRSKLTNDSLKFLERVPNLLILSIVHEGYEGKSLQFRAGEFQRLKELQLESLQSLSSISIDEGALQSLKKLGLKNIPKLKMEPSDIYHLKKLEVLNIQDMPIEFEQNIVANVPFARII* 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0258 1041 Gene3D - 481 568 IPR042197 -
Apr2g0258 1041 Pfam Rx N-terminal domain 8 92 IPR041118 -
Apr2g0258 1041 Pfam NB-ARC domain 322 570 IPR002182 GO:0043531
Apr2g0258 1041 PRINTS Disease resistance protein signature 340 355 - -
Apr2g0258 1041 PRINTS Disease resistance protein signature 420 434 - -
Apr2g0258 1041 PRINTS Disease resistance protein signature 519 533 - -
Apr2g0258 1041 PRINTS Disease resistance protein signature 986 1002 - -
Apr2g0258 1041 Gene3D - 302 475 IPR027417 -
Apr2g0258 1041 PANTHER - 30 1029 - -
Apr2g0258 1041 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 301 583 IPR027417 -
Apr2g0258 1041 SUPERFAMILY L domain-like 682 1027 - -
Apr2g0258 1041 Gene3D - 6 121 - -
Apr2g0258 1041 Gene3D Ribonuclease Inhibitor 697 1037 IPR032675 -
Apr2g0258 1041 Gene3D - 569 658 IPR036388 -
Apr2g0258 1041 CDD RX-CC_like 7 133 IPR038005 -
Apr2g0258 1041 PANTHER DISEASE RESISTANCE PROTEIN RP 30 1029 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0258 Apr-Chr2 3146961 3150086 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0258 313 526 WRKY Transcription Factor Family AT4G12020 30.275 5.77e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0258 K13457 - gmx:100819372 721.85