Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0248 ATGGTGCCACTAAATTTGATGCCTGACTTAGTGAGGAATTTGGCTCATGATCATGCACAAGTGGTGCCTATATCACTCTTTGTGGCTGTTCTCTGCCTCTGCTTGGTCATTGGTCACTTACTTGAAGAAAATAGATGGGTTAATGAGTCCATTGTTGCCATTGTAGTTGGATGCATTGCTGGAATGATACTGTTATTCATCACCAAAGGGAAGAGTTCTCACATCCTTACATTTAATGAAGAACTATTCTTCATATATCTCCTTCCTCCCATTATATTCAATGCAGGATTTCAGGTGAAGAAGAAACAGTTCTTCCATAACTTTTTAACCATCATGCTTTTTGGAGTGATTGGAGTTTTTATTTCATCTTCTCTTATTACGTGCGGCAGCTGGTGGCTGTTCCCCAAGTTAAACTTGCTAGGCCTGACAGTGCGAGATTATCTTGCTATGGGAACAATTTTCTCATCAACGGACACAGTTTGTACCCTGCAGGTTCTCCACCAAGATGAAACCCCTTTACTATACAGCCTAGTCTTTGGAGAAGGAGTGGTAAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAAAAGCTTGATGTTTCACGATTTAATGGCAGGATGTTCCGCGTTATTGGAGATTTCTTGTATCTATTTTCATCAAGCACTGGTCTTGGGATTCTAGCTGGACTTCTCACAGCTTATATCTTGAGAGCTTTAAGCTTTGGAAAACATTCAAGTGTTCGTGAAATTGCACTGATGATCTTAATGGCATACCTATCCTACATGTTGTCAGAGCTACTCAATCTAAGTGGAATCCTCACTGTTTTCTTTTGTGGAATACTAATGTCACATTATGCATGGCATAATGTGACTGAAACTTCAAGGATCACAACCAGGCATGTGTTTGCAACAATGTCATTCATTGCTGAAACCTTCATATTTCTTTATGTGGGCATGGATGCTCTTGACATTGAAAAGTGGAAGATGACCCAATTAAGCTATGGAAATTTGACAGGAATTTATGGTTGCTTAATCTTACTGATATTGCTTGGGCGGGCTGCATTTGTTTTTCCTCTCTCTGCTCTTGCCAATTATATGAACAGGCGTTCTGACCAAGCATCAAGTATCACATTCAAACATCAGATAGTCATTTGGTGGGCTGGGCTAATGAGGGGAGCAGTCTCAATTGCTCTGGCTTTCAAACAGTTCACATATTCTGGTGTTACTTCTGATCCAGTTAATGCAACAATGATTACCAATACCATTATTGTTGTCCTTTTCACCACACTGGTGTTTGGTTTTCTCACAAAACCACTCATTAGATATCTGCTTCCTTACAACGCCACAAGGAAAAACACCAGCCATGAAGAATCAGGTCCTGTTGAGGATCTAAATCTACCTTTGATATCCTTTGAGGAGTCAGCAGCAACCAACATAAGCCGTGCAAAGGAAAGTTTGTCCATGTTAATAGAAAGTCCTGTTTACACCATACATTACTATTGGAGGAAATTTGATGATGCTTACATGAGACCTATATTTGGGGGACCTCGTGAAAACCAGCCACAGTGCTAG 1575 0.4038 MVPLNLMPDLVRNLAHDHAQVVPISLFVAVLCLCLVIGHLLEENRWVNESIVAIVVGCIAGMILLFITKGKSSHILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISSSLITCGSWWLFPKLNLLGLTVRDYLAMGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLDVSRFNGRMFRVIGDFLYLFSSSTGLGILAGLLTAYILRALSFGKHSSVREIALMILMAYLSYMLSELLNLSGILTVFFCGILMSHYAWHNVTETSRITTRHVFATMSFIAETFIFLYVGMDALDIEKWKMTQLSYGNLTGIYGCLILLILLGRAAFVFPLSALANYMNRRSDQASSITFKHQIVIWWAGLMRGAVSIALAFKQFTYSGVTSDPVNATMITNTIIVVLFTTLVFGFLTKPLIRYLLPYNATRKNTSHEESGPVEDLNLPLISFEESAATNISRAKESLSMLIESPVYTIHYYWRKFDDAYMRPIFGGPRENQPQC* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0248 524 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 22 459 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr2g0248 524 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr2g0248 524 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr2g0248 524 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr2g0248 524 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Apr2g0248 524 PANTHER SODIUM/HYDROGEN EXCHANGER 13 520 IPR018422 GO:0006812|GO:0015299|GO:0016021
Apr2g0248 524 Pfam Sodium/hydrogen exchanger family 28 441 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Apr2g0248 524 PANTHER SODIUM/HYDROGEN EXCHANGER 13 520 - -
Apr2g0248 524 Gene3D - 143 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0248 Apr-Chr2 3062438 3068086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0248 10 524 Antiporters AT5G55470 71.977 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0248 - - gmx:100813332 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0248 2 3062438 3068086 Apr2g0248 2 3062438 3068086 ECH