Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0245 ATGGCATCTTCAGATGATGAGGGTGAGGCTCAGCTACTATCTGTTTCAAATTACCATTTTGAAGATGACAAAGACGCGCCTGTATCGTTTTCTGTGTTGCCAATTCAATGGAGTGAGTCTGAGTATCCGGTTGGGAAGAAAGAGCAGGTGTTTCTGCACGGTTCTGCGGACAATGGGCTGCAGAAAATCTTTATGCAAGTCGTTGCATGGAGGTTTGATCTTTCTTATGTGAGGCCTGAGATATCAGTGCTATCGAAGGATGGGAAATGGATTAAACTTGAGAAGCCTAGGAAAAGCTATGAGGATACCATAAGGACTATTTTAATCACCATTCACTTCCTGAATTATGTGAAGAAGAATCCTGACGCAACTGCCAAATCTGCGTGGGATAACTTGAGTAAGAATAAGGAGTTTAGCTCTTATGAGATTATGCCTTCTCAAAAAGATTTATTGAACCATATGGCTTTAATGGGTGAAGCTGCCAAAAGGGATGCTGTCTTAGCGAAGTCAAAGCTTCTGCTCATGGTTCTGGATGATAAGGATAAGCTGAAGATTAATAAACTTTCTGATGAGGAAGTTAAAGATTTAGCACGACCTGGATTTATAATTGATGATATGGACAATGATATGATTGATGAAACTGTTGAAGATTTAGATGAAGAGGATGACTTATTTGATTCTGTTTGCACAATTTGTGATAATGGTGGTAATCTTTTGTGTTGTGATGGAAAGTGCATGAGGTCATTTCATGCTAGTAAAGAAGATGGTGAGGATTCTTCTTGTGCCTCTCTTGGTTTTAAGAAGAAGGAAGTTGATGAGATCCAGAACTTTTATTGTAAGAATTGTGAATTTAATCAGCATCAGTGCTTTGCATGTGGCACACTAGGATGTTCTGATAAATTTTCGAAGGCTGAGGTCTTCAAATGTGCTTCTGCAACCTGTGGCCTGTTTTATCATCCACATTGTGTTGCAAAGTTACTTCACAGGGTAGTTGAGGATGCTCCGAAGGATCTTGAGAGAAATATTGCTGGGGGGGAACCTTTTACTTGTCCTACTCATTATTGCTATGTCTGTAAAGAAATGGAAGACAAGAAGGAACATGAGTTACAATTTGCTGTTTGTAGGCGTTGCCCCAAGTCTTATCATCGCAAATGTTTGCCAAGAAAGATCTCTTTTGAAGATATAGAGGATGAAGGCATTATAACAAGGGCTTGGGAAAAACTTCTACCAAACAATCGCATTCTTATATATTGTTTAAAACATGAGATTGATGATGAACTTGGGACTCCTATGAGAGATCATCTAAAGTTTCCCAATGCTAAGGCTACTGTTCGAGAAATTAAAACTGAGGAGAAGGCAAAGCCTGCAATTGAAAAGAGAGTTATATCGAACAAAAACATCGTTGACTCAGAAAATTTATTTGGCAAAAAAACTACTGTTAAGGTTTCTAAACTGTCTGGTAAAATGTCATCTGGGAAAGTTGGTGACAAAAAGTCTGCAAACATTTCTGGATTAAATATCCCAAGGAGAAAAACAAAGGAAGCATCAAGAAGGAGTTTGAATGAAAATAAAAGGTCAATCTCAAAGGATACTGAAATATCTGATGGTGAGGAAAATCAGGCCTCATTGGGTGAGCAATTATTTGCTTTCTGGCAGAAGGGTTCTGAGAAAATTAATTCTGGTAATACCCTGTCTGTTAAGCCTACTAAAAAGCTAAGTAGTGCATCAACCCCATTAGATGCAGATTCAGAGAGGAGATTGTTGGCTTTGTTTAAAGAAGCTACCTCATCAATTACTTTGGAGAAAGTTATAAAAGACCATAAGTTTGCTTCTACTCATACTCATTCGTTGAAAAGTATTGTGGAGAAAACCATTACAGTGGGAAAGTTGGAAGGTTCAGTTGAGGCTGTTCGAACAGCTCTAAGGATGCTAGATGATGGGCACAATATACGAGATGCAGAAGCTGTTTGTGGCCCAGATGTTCTAAACCAGATATATAAGTGGAAGCTGAAAGTTTATCTTGCACCTGTTCTGTATGGTAATCGCTACACATCATATGGTCGCCATTTTACACAATTTGAAAAGCTGGAAGGGATTGTTGATAAACTCCATTGGTATGTTCAGAATGGTGATACAATTGTGGACTTCTGTTGTGGTGCTAATGATTTTAGCATTCTAATGAAGAAAAAGCTTGAACAGACTGGGAAGAGGTGCTCGTACAAAAACTATGATTTACTTCCAACAAAGAATGATTTTAATTTTGAGATGAGAGATTGGATGACTGTCCAACAAAAAGAGTTGCCTACAGGGTCGCAGTTGATAATGGGCCTCAATCCCCCCTTTGGAGTTAAAGCAATTTTGGCTAATAAGTTTATAGATAAAGCTCTCGAGTTCAGACCAAAGCTCTTGATTCTCATAGTACCACCAGAGACAGAGAGGCTAGATGAAAAACGGTCGGCTTATGATCTTGTCTGGGAGGATGAAAAGTTTCTATCAGGCAAGTCATTTTATCTACCTGGATCAGTTGATTCTAACGACAGGCAAATGGAACAATGGAATGTAAGGCCACCCCCACTCTATCTATGGAGTCGTCCTGACTGGACTGATAAACATAAGGCCATAGCCCGGGAGCATGGTCATTATGATGATGATATGCTGAGTCATGATATCTTGAAGTCAACTGATGATGAAAATCAGGCACCTATGAATGAAAGGCAGATGGGATGCTTGACCCACAGAAATGTTGATCGAGAGAGTCAAGAGAGATGGGAATCTAGGGCAAGCAAGGCTGATAAGACCTCATGGAAGAGGAAAGGAGTTGTGGAAAATGATGGTCGAGGACTTGGTGTGACCTCACCACCCAAAAGGCAGTCTGTAAATCAAATGCTTGAGGGAGTACCTTACCATAGTCAATCTAATCCAATTGAGGGGAGATCCTCTGTTGAAGGTTTTAAGCTCAAATTTGACATGACACCTCCGTATACTGAGATTGGTGATAAAGATTATAGGCATTTGGAGCCCACTTCCTCGCACATGGAGTTTGGAGCAGCCTATAGTGGGTCCCAAAATTGGCCAGGCGTTGCCAGTCCCCATTTCAGTTCTGGGGTTACGGATATAGAGGAACACCATAGCAACCTTCAGGGAAACAGCACCAATAACCTTGGGTATAGACTCCATGTCAGGGAGGATGAGAAATACATGAGGGAATCAGAAATAAGGCAACATATTCGTCATTATGGGCTTCAGAATCCTGATTCTATGAGGAGCAATTATCTATCTGGTCATGATCCTACTTATAGACATAATGGATCAAGTTATGCAGTAGGTGGTTCATCGTATCAGTCTTCTTACCTGATGGATACACCAGCTATGCAACGATATGCACCTCGCCTGGATGAATTAAACCATGTCAGGATGGATCCATTGGGATCTGAACCTCCTATACCTGGTACAAATGACACTTTCGAACGTAGTGTGCCCCAACCTGGATATGGAAGTTGGATGCCAGGTTTTGCAGCTGGTTTTCACAATGTGTATTCACGCCAGAGTTCAGCAGATCGGTTCAATCAGTAA 3573 0.405 MASSDDEGEAQLLSVSNYHFEDDKDAPVSFSVLPIQWSESEYPVGKKEQVFLHGSADNGLQKIFMQVVAWRFDLSYVRPEISVLSKDGKWIKLEKPRKSYEDTIRTILITIHFLNYVKKNPDATAKSAWDNLSKNKEFSSYEIMPSQKDLLNHMALMGEAAKRDAVLAKSKLLLMVLDDKDKLKINKLSDEEVKDLARPGFIIDDMDNDMIDETVEDLDEEDDLFDSVCTICDNGGNLLCCDGKCMRSFHASKEDGEDSSCASLGFKKKEVDEIQNFYCKNCEFNQHQCFACGTLGCSDKFSKAEVFKCASATCGLFYHPHCVAKLLHRVVEDAPKDLERNIAGGEPFTCPTHYCYVCKEMEDKKEHELQFAVCRRCPKSYHRKCLPRKISFEDIEDEGIITRAWEKLLPNNRILIYCLKHEIDDELGTPMRDHLKFPNAKATVREIKTEEKAKPAIEKRVISNKNIVDSENLFGKKTTVKVSKLSGKMSSGKVGDKKSANISGLNIPRRKTKEASRRSLNENKRSISKDTEISDGEENQASLGEQLFAFWQKGSEKINSGNTLSVKPTKKLSSASTPLDADSERRLLALFKEATSSITLEKVIKDHKFASTHTHSLKSIVEKTITVGKLEGSVEAVRTALRMLDDGHNIRDAEAVCGPDVLNQIYKWKLKVYLAPVLYGNRYTSYGRHFTQFEKLEGIVDKLHWYVQNGDTIVDFCCGANDFSILMKKKLEQTGKRCSYKNYDLLPTKNDFNFEMRDWMTVQQKELPTGSQLIMGLNPPFGVKAILANKFIDKALEFRPKLLILIVPPETERLDEKRSAYDLVWEDEKFLSGKSFYLPGSVDSNDRQMEQWNVRPPPLYLWSRPDWTDKHKAIAREHGHYDDDMLSHDILKSTDDENQAPMNERQMGCLTHRNVDRESQERWESRASKADKTSWKRKGVVENDGRGLGVTSPPKRQSVNQMLEGVPYHSQSNPIEGRSSVEGFKLKFDMTPPYTEIGDKDYRHLEPTSSHMEFGAAYSGSQNWPGVASPHFSSGVTDIEEHHSNLQGNSTNNLGYRLHVREDEKYMRESEIRQHIRHYGLQNPDSMRSNYLSGHDPTYRHNGSSYAVGGSSYQSSYLMDTPAMQRYAPRLDELNHVRMDPLGSEPPIPGTNDTFERSVPQPGYGSWMPGFAAGFHNVYSRQSSADRFNQ* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0245 1190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 225 285 IPR013083 -
Apr2g0245 1190 MobiDBLite consensus disorder prediction 487 538 - -
Apr2g0245 1190 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 1 1185 - -
Apr2g0245 1190 CDD PHD2_NSD 288 353 - -
Apr2g0245 1190 Pfam Cytosine specific DNA methyltransferase replication foci domain 11 132 IPR022702 -
Apr2g0245 1190 MobiDBLite consensus disorder prediction 510 536 - -
Apr2g0245 1190 PANTHER ENHANCED DOWNY MILDEW PROTEIN 1 1185 - -
Apr2g0245 1190 MobiDBLite consensus disorder prediction 916 937 - -
Apr2g0245 1190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 401 IPR013083 -
Apr2g0245 1190 SMART PHD_3 288 354 IPR001965 -
Apr2g0245 1190 SMART PHD_3 355 422 IPR001965 -
Apr2g0245 1190 SMART PHD_3 228 283 IPR001965 -
Apr2g0245 1190 CDD PHD3_NSD 354 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0245 Apr-Chr2 3030503 3043432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0245 221 329 PHD Transcription Factor Family AT3G14980 30.275 8.75e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0245 - - gmx:100803073 1826.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0245 2 3030503 3043432 Apr2g0245 2 3030503 3043432 ECH