Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0234 ATGGCGGAAACTGCATTGTCCTTGACTCGAGATCATTTGTTTCCATTCTTGAAGGAAGCATTCAATATGATCAAGGGCCTTCCAAAAGCAGTTGCAGACACGAAAGATGAACTGGAAATGATTCAAGCCTTCATTCATGATGCAGATATGATGGATGCAGCTAAAGAAGACATGACGCATGACACAATCAAAAGGAGGGTGAAGGAGCTGATAGAAGTTGCTTTTCGTATGGAAGATGTCATTGATGAATATATGATCTTTGAGGAACAACAGGCTGGTAATGATCCTGGATGTGCAGCTTTGAGTAATCCTGTTGACTTCATCAAAGTTATGATCCTTCGTCTTCAAATAGCGCACAAGATTAAGGACATCAATTCACAAGTTTGTGAAATCATGGAAAGCAGTAAAAGTGACAATCGCTTCCAAATCCAATCTTCTGGAAAACAAGGACCGAGCAGTTCTAGAGGATGCCAAAATGTCCAATGGCAGAACCTTCGACATGCTCCATTTTACATGGAAGAAGCTGAAATTGTGGGTTTCGAAGCCCCTAGAGATAAATTGGTTCATTGGTTGGTAAATGGAAGAGCGAAGCGCACTGTGATCTCTGTGGTAGGAATGGGAGGGTTGGGAAAGACCACTCTTGCCAAGAAAGTTTTTGACAGTCGAGAGGTCGTTGGACACTTCGATTGCCGTGTTTGGATCACAGTGTCTCAATCCTACATGGCAGAAGGGCTGTTGAGGGGCATGCTGCTGAAGATTTGCAAAGAAAAGAAGAAAGATCCTCCTCAGAATATTTCTACAATGGATCGATGGTCGTTGATAAGTGAAGTGAGAAATCTCTTGAATGGAATGAGGTATGTTCTCTTGTTTGATGATGTGTGGAATGAGCATTTTTGGGATGAAATTGAATTTGCAGTAACTGATAATAAAAATGGAAGTAGGATACTTATCACAACAAGAGACATGAATGTTGCTCTATACTGTAAGAAATCTTCTTTTGTTGAAATCCATAACTTGCGCTCCTTGTCCCCAGAAAAATCTTGGCAACTCTTTTGCAAGAAGGCCTTCCAATTTGAGTCTAATGAATGCTGTCCAAGAGAGCTCAAAGATATATCCTCTAAGATTGTTGAAAAATGTGAGGGTCTACCACTTGCAATAGTGGTCATTGGTGGTCTTTTATCTATGAAAGATACGACTGCAGTTGATGAATGGGTAAACTTCTATAATGAGCTGCAGAAGAATCAACATATAGATAGCATAACCAATATTTTGGGTTTAAGTTATCATGATTTGCCATACCATCTTAAATCGTGCCTTTTGTATTTTGGAATATATCCTGAAGACTATGAAATTAAATCCAAAAGACTAATTCGGCAATGGATGGTTGAAGGGTTTGTAAAACATGAGGAGGGAAAAACTTTAGAGAAAGTTGCAGAAAGATATTTAAGAGAGTTGATTGATAGAAGTTTGGTGCAATCATCTTCACTTAGCATTGATGGGAGAGTTAGAAGTTGTCGAGTTCATGACCTAACACGTGAGATGATTCTTAGAAAATGTGAGGATTTGAGGTTTTGTCATGTGGTACATGGTGAGTTGTTGATAGCCCGACGCTTATCAATAACAACTGGTTCCAATGATTTAATGAGTAGTAATGAACGACCACACATTCGATCACTTTTTGTATTCACAGATGAATTACCTTTACACTTTATGAGTAGAATATCTACTGAATACATGTTAAAGGTACTTGATTTTGAAGAAGTTAAGCGGTCTTTAATTCATGAAAGTTTGTGGAATTTAAACCACTTGAAGTATTTAGGCTTCGAGAGTTACTTAATCCACTCAAAGTATATACACTTGGGGAATTTAGGGAATTTAGGGAATTTAATACACTTGAAGTATTTAAGCTTCAGGAATACACAAATATATATTCTTCCAAATTACATTGCTAGGCTACAAAATTTGGAGACTTTGGACCTAAGGGGAACATATGTGGAAGAAATTCCAAGGGAGATTTGCAAACTTAGTAAGCTACAACATCTTTTAGGCGATTATCTGTCTATGATTCAGTTGAAGAATGGTATTGGAAGCATGACATCCCTACAAACTCTGGGTAAAGTGAAAATAGACAAACATGGTGCAGAGCAAACAAGAGAGCTGGGAAGGCTAACACAATTAAGGAAGTTGAGCTTGTTTGATGTTAGGGAAGAACAGGGAAGTGCTCTCTGTTCCTCAATAAATAAGATGCAATGTTTGGAAAGCCTACGCATTGATTCAAGAATTCTAGATGACATCCTTTGTTCACAGTTTAATTCAGCCCCACCTATGCTTCGGAAGCTTAGCCTATTATCCAAGTCTAAGAAATTGCCAGAGTGGATTCCAAAGCTTCAAAACCTTGTTAAGCTAAGCTTGATAGACTTCCAGTTAATTGATGATCCAATGAAATTATTAAAAAATTTGCCAAATTTGTTGTACCTCCATATTTTCTCATATAAAGGTGTAAGCATGCATTTTCAAGATGGGGGGTTTCAGAAACTGAAAGATCTAAGACTCATATATTTGCCAAACTTGAATTCCATCTGTATTGACAAAGGAGCACTGCATTCTCTCAAATCCCTTTGGTTAGAATTTATCCCTAAACTTGAAGAGGTACCCTCTGGCATCCAACACTTGAAGCAACTTGAAGTTCTCCATGTGGAAGATATGTCAACTGAATTTGAGAGCAACATATCTCGTATTAGAGGACGAAGTCACTCCATAATTGTGCATGTGCCTGTTGTAAGAATTGTCAACTTCCACAGATATTACACTTTTCACCACTGA 2823 0.3812 MAETALSLTRDHLFPFLKEAFNMIKGLPKAVADTKDELEMIQAFIHDADMMDAAKEDMTHDTIKRRVKELIEVAFRMEDVIDEYMIFEEQQAGNDPGCAALSNPVDFIKVMILRLQIAHKIKDINSQVCEIMESSKSDNRFQIQSSGKQGPSSSRGCQNVQWQNLRHAPFYMEEAEIVGFEAPRDKLVHWLVNGRAKRTVISVVGMGGLGKTTLAKKVFDSREVVGHFDCRVWITVSQSYMAEGLLRGMLLKICKEKKKDPPQNISTMDRWSLISEVRNLLNGMRYVLLFDDVWNEHFWDEIEFAVTDNKNGSRILITTRDMNVALYCKKSSFVEIHNLRSLSPEKSWQLFCKKAFQFESNECCPRELKDISSKIVEKCEGLPLAIVVIGGLLSMKDTTAVDEWVNFYNELQKNQHIDSITNILGLSYHDLPYHLKSCLLYFGIYPEDYEIKSKRLIRQWMVEGFVKHEEGKTLEKVAERYLRELIDRSLVQSSSLSIDGRVRSCRVHDLTREMILRKCEDLRFCHVVHGELLIARRLSITTGSNDLMSSNERPHIRSLFVFTDELPLHFMSRISTEYMLKVLDFEEVKRSLIHESLWNLNHLKYLGFESYLIHSKYIHLGNLGNLGNLIHLKYLSFRNTQIYILPNYIARLQNLETLDLRGTYVEEIPREICKLSKLQHLLGDYLSMIQLKNGIGSMTSLQTLGKVKIDKHGAEQTRELGRLTQLRKLSLFDVREEQGSALCSSINKMQCLESLRIDSRILDDILCSQFNSAPPMLRKLSLLSKSKKLPEWIPKLQNLVKLSLIDFQLIDDPMKLLKNLPNLLYLHIFSYKGVSMHFQDGGFQKLKDLRLIYLPNLNSICIDKGALHSLKSLWLEFIPKLEEVPSGIQHLKQLEVLHVEDMSTEFESNISRIRGRSHSIIVHVPVVRIVNFHRYYTFHH* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0234 940 Pfam NB-ARC domain 183 428 IPR002182 GO:0043531
Apr2g0234 940 Gene3D - 428 519 IPR036388 -
Apr2g0234 940 PANTHER DISEASE RESISTANCE PROTEIN RP 31 906 IPR044974 GO:0006952
Apr2g0234 940 PRINTS Disease resistance protein signature 200 215 - -
Apr2g0234 940 PRINTS Disease resistance protein signature 280 294 - -
Apr2g0234 940 PRINTS Disease resistance protein signature 379 393 - -
Apr2g0234 940 PRINTS Disease resistance protein signature 650 666 - -
Apr2g0234 940 CDD RX-CC_like 2 133 IPR038005 -
Apr2g0234 940 Gene3D - 5 122 - -
Apr2g0234 940 SUPERFAMILY L domain-like 507 925 - -
Apr2g0234 940 PANTHER - 31 906 - -
Apr2g0234 940 Gene3D - 164 336 IPR027417 -
Apr2g0234 940 Gene3D - 341 427 IPR042197 -
Apr2g0234 940 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 442 IPR027417 -
Apr2g0234 940 Pfam Rx N-terminal domain 8 92 IPR041118 -
Apr2g0234 940 Gene3D Ribonuclease Inhibitor 564 705 IPR032675 -
Apr2g0234 940 Gene3D Ribonuclease Inhibitor 714 917 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0234 Apr-Chr2 2947084 2949906 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0234 201 390 WRKY Transcription Factor Family AT5G45050 26.842 3.17e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0234 K13457 - gmx:100819372 848.966