Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0232 ATGAATTGTTCTAATCCACCGAAGGTTATATATGTTAATGAATCAGGGCAAAGAGGAACCTTCAAAACTATCCAAAGTGCAATTGAATCTCTCCCTAAACCCAACTCTCAATGGACTCATATCAGAATCTCTGCAGGAACTTACACAGAAACTGTGTTCATCTCAAAACAGAGGGCATGCCTTTATCTAGAAGGAGGTGGCAGTTCATCCACCATTGTTACATCAAGTGGCCATGACAGAATGAGTACTTCTTTCACTTTTGCATCATTAGCTGATGATATCGTAGTAAAGGGCATTTCATTTGTGAACTCATATAACAGGCCACCTTATGCGCAACTTAGTAAAGGCAATTTACCAGCATTGGCAGCCAAAATAGAAGGTGACAGAACTGCCTTTTATAACTGTTCCTTCAAAGGGGTGCAAGATACCTTGTGGGATTGTAAGGGACGCCATTACTTCAAACATTGTTACATTCAAGGTGCAATAGATTTCATATTTGGAGATGCACAATCCATCTATGAGAAGAGTGTGATCTACTTTACATTGGGGGGAGATGGGCCAAAAGGGCATGATGGCACCATAACAGCACAAAAGAGAGGATCCATGGATTCCCCAACAGGGTTTGTGATCAAGGAATGCAACATAAGTGGGAATGGAAGGGCTCAACTTGGAAGAGCTTATGGACCATTTTCAAGAGTTATTATTGCTAATTCGACTCTCAGTGATGTGGTTCGGCCAGAGGGTTGGTCTGCTTGGGGCCAAGTTGGACACGAAGCAAATCTTACGTTTGTGGAGGAAGGTAACAGTGGAGTAGGGGCAAACCAGTCTAAACGTGTCTCTTGGATGAAGCATTTGGATGCAAATGAACTAAACAAGTTTTTGAATATTTCTTACATCGACCAAGAAGGGTGGATCACCAAACAGCCAATTTATTATTATTAG 942 0.4161 MNCSNPPKVIYVNESGQRGTFKTIQSAIESLPKPNSQWTHIRISAGTYTETVFISKQRACLYLEGGGSSSTIVTSSGHDRMSTSFTFASLADDIVVKGISFVNSYNRPPYAQLSKGNLPALAAKIEGDRTAFYNCSFKGVQDTLWDCKGRHYFKHCYIQGAIDFIFGDAQSIYEKSVIYFTLGGDGPKGHDGTITAQKRGSMDSPTGFVIKECNISGNGRAQLGRAYGPFSRVIIANSTLSDVVRPEGWSAWGQVGHEANLTFVEEGNSGVGANQSKRVSWMKHLDANELNKFLNISYIDQEGWITKQPIYYY* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0232 313 Gene3D - 4 313 IPR012334 -
Apr2g0232 313 ProSitePatterns Pectinesterase signature 2. 158 167 IPR033131 -
Apr2g0232 313 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 309 - -
Apr2g0232 313 SUPERFAMILY Pectin lyase-like 6 310 IPR011050 -
Apr2g0232 313 Pfam Pectinesterase 17 300 IPR000070 GO:0030599|GO:0042545
Apr2g0232 313 PANTHER PECTINESTERASE 4 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0232 Apr-Chr2 2926070 2929480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0232 4 258 Carbohydrate Esterase AT2G19150 45.490 1.22e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0232 - - lang:109339855 406.757