Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0223 ATGGCCGAAACTGCATTGTCCTTGGCTCGTGATCATTTGTTTCCATTCTTAATGGAAGTTGGCAACATGATCAGGGGCGTCCCAGAAGATGTTGATGACATGAAAAATGAACTAGAAAAGATTCAAGCCATCATTCATGATGCAGATAGAGTGGCTGCAGCTGGAGACAACACCACACGTGAAGAAGTTAAAGCAAAGGTGAAGTTGCTGATAGAAGCAGCTTTTAGCATGGAAGATGTAATTGATGAATATGTGATCCATCAGGAACAAGAGACTCGAGATCCTGGATGTGCAGCTTTACCCTGTCAGCCTGCTGATCTCTTCAAAACCTTGATGCTTCGTCTCCAAATATCATATAAGATTAAGGATGTTAAATCACGAGTTCGTGCAATCAATGAAAGCAGTGAAATTGAGAGTGCGTTCCATGTCCAACCTTTTCTAGAAAAAGGAGCAAGCAGTTCTAGAGGAAACCAAAACACGACTTTGGAGAAGATTCGAAAGGCTCCCCTTTACATGGAAGAAGCTCAAATTGTGGGCTTTGAGGCCCCAAGAGATGAATTGGTGGGTTGGTTGATAGAGGGAAGAGCAGAGCGCACTGTCATCTCTGTGGTAGGAATGGGAGGAGTGGGAAAGACCACTCTTGCCAAGAAAGTGTTTGACAACAAGGAGGTGATCGGGTTCTTTGGTTGCCATGCGTGGATCACAGTGTCTCAGTCCTATACTGTAGATGGCTTGTTGAAGGACATGTTGCAGAAATTTTACAAAGAAAAACAAGTGGATCCTCCTCAGGATATTTCTACAATGCAAGGCGATTCATTATTAGATGAAGTGAGAAACTACTTGAGCAAAAAGAGGTACCTCATTGTCTTTGATGATGTTTGGGATGTCAAATTTTGGGATGAGATAGAATTTGCAACTCTTGATAATCAAAACGGAAGTCGGATACTTATGACCACTAGGGACATGAAAGTTGCGGAGTCTTGCAAAAAATCTTCTTTTGTTAAAATACATGAATTAAAACCCCTATCTCTAGCACAGTCACGGGAGCTCTTTTGCAGGAGGGCATTCCAATTTGAATTTAATGGGTCTTGCCCAGCAGAATTAGTGCATATATCTTCCGAGATTGTTGAAAAATGTGATGGTTTACCACTAGCATTAGTGGTGGTTGCTGGTCTTTTATCTTGTAAAGGTTCTAGAGTTGACGAGTGGGAAGAGTTCAGTCAGAATCTAAATTTAGAGCTGACAAGGAATAAAGAATTAGGTGATATAACAAAGATTTTGAGTTTCAGTTATAACAATTTGCCTTACCATCTTAAATCATGCTTTTTGTATTTTGGAACGTTTCCTGAAGACTTTGAAATTGCATCGAAAAAATTGATTCAGAAATGGATAGCTGAAGGTTTTGTAAAATATGAAGCAGGGAAAATCTTAGAGAAGGTTGCTGAAGGATATTTAAAAGAGTTGATCGATAGAAGTTTGGTGCAAGTATCTTCACTTAGCATTGATGGGAAAGTTAAAGGTTGTCGTGTTCATGACCTAACACGTGAGATGATTCTTAAAAAATGTGAGGATTTGAGATTTTGTCATAGGGTACTTGATGGGTCAGCATTGAGTGGGATAACTCGACGCCTATCAATAGCAACTCCTGTCAACGATATAATAAGTAACAGTGAATGCTCACCTATTCGCTCACTCATTGTTATTACAAATGAAGATTTATCTGAAGAATTTGTGAGGAGAATACCTACCAAATACATGTTATTGAAAGTGCTTGATTTTGGATATAGCTTTTTGGATTTTGTTCCCGAAAATTTGGGGAATTTAATCCATTTAAAGTATTTAAGAATCGGACCTGCAGTGATAAGAAGTATTCCAAAATCCATTGCTAAGTTGCAGAACTTGGAGACCTTGATTCTATGGGGATGTTTTGGAGTTCTGATGCCAATAGAGGTGAGCAAGCTTAGAAAGCTACGACATCTTCAAGCTGGTTCTATGCGTATGACTCAATCGAAGGATGGTATCGGAAACATGACATCCCTAGAAACACTAGGTCATGTGGGAACATTTGATGATGGAGTAGAGCTAATTCAAGAATTGGGAAGGCTAACACAAATGAAGAAGTTGGGTTTGGGAGAATGA 2139 0.3955 MAETALSLARDHLFPFLMEVGNMIRGVPEDVDDMKNELEKIQAIIHDADRVAAAGDNTTREEVKAKVKLLIEAAFSMEDVIDEYVIHQEQETRDPGCAALPCQPADLFKTLMLRLQISYKIKDVKSRVRAINESSEIESAFHVQPFLEKGASSSRGNQNTTLEKIRKAPLYMEEAQIVGFEAPRDELVGWLIEGRAERTVISVVGMGGVGKTTLAKKVFDNKEVIGFFGCHAWITVSQSYTVDGLLKDMLQKFYKEKQVDPPQDISTMQGDSLLDEVRNYLSKKRYLIVFDDVWDVKFWDEIEFATLDNQNGSRILMTTRDMKVAESCKKSSFVKIHELKPLSLAQSRELFCRRAFQFEFNGSCPAELVHISSEIVEKCDGLPLALVVVAGLLSCKGSRVDEWEEFSQNLNLELTRNKELGDITKILSFSYNNLPYHLKSCFLYFGTFPEDFEIASKKLIQKWIAEGFVKYEAGKILEKVAEGYLKELIDRSLVQVSSLSIDGKVKGCRVHDLTREMILKKCEDLRFCHRVLDGSALSGITRRLSIATPVNDIISNSECSPIRSLIVITNEDLSEEFVRRIPTKYMLLKVLDFGYSFLDFVPENLGNLIHLKYLRIGPAVIRSIPKSIAKLQNLETLILWGCFGVLMPIEVSKLRKLRHLQAGSMRMTQSKDGIGNMTSLETLGHVGTFDDGVELIQELGRLTQMKKLGLGE* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0223 712 Pfam NB-ARC domain 183 433 IPR002182 GO:0043531
Apr2g0223 712 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 445 IPR027417 -
Apr2g0223 712 Pfam Rx N-terminal domain 6 92 IPR041118 -
Apr2g0223 712 Gene3D - 431 522 IPR036388 -
Apr2g0223 712 PANTHER - 35 710 - -
Apr2g0223 712 CDD RX-CC_like 2 133 IPR038005 -
Apr2g0223 712 Gene3D - 342 430 IPR042197 -
Apr2g0223 712 PRINTS Disease resistance protein signature 200 215 - -
Apr2g0223 712 PRINTS Disease resistance protein signature 280 294 - -
Apr2g0223 712 PRINTS Disease resistance protein signature 379 393 - -
Apr2g0223 712 PRINTS Disease resistance protein signature 629 645 - -
Apr2g0223 712 SUPERFAMILY L domain-like 509 710 - -
Apr2g0223 712 Gene3D Ribonuclease Inhibitor 558 712 IPR032675 -
Apr2g0223 712 Gene3D - 5 118 - -
Apr2g0223 712 Coils Coil 31 51 - -
Apr2g0223 712 Gene3D - 160 336 IPR027417 -
Apr2g0223 712 PANTHER DISEASE RESISTANCE PROTEIN RP 35 710 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0223 Apr-Chr2 2831782 2833920 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0223 173 410 WRKY Transcription Factor Family AT4G12020 27.459 2.15e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0223 K13457 - gmx:100819372 686.411