Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0221 ATGGCCGAACCTGCATTGTCCTTGGCTCGTGATCATTTGTTTTCATTCTTAATGGAAGTTGGCAACATGATCAGAGGCGTCCCAAAAGATGTTGATGACATGCAAAATGAACTAGAAAGGATTCAAGCCATCATTCATGATGCAGATAGAGTGGCTGCAGCTGGAGACGACACCACACGTGAAGAAGTTAAAGCAAAGGTGAAGTTGCTGATAGAAGCAGCTTTTACCATGGAAGATGTAATTGATCAATATGTGATACATCAGGAACAAGAGCCTCGTGATCCTGGATGTGCAGCTTTTCCCTGTCATCCTGCTGACCTCATCGATACCTTGATGCTTCGTCTTCAAATAGGATATAAGATTCAGGATGTTAAATCACGGGTTCGTGCATTCAACGAAAGCAGTGAAAGAAAGAGTGACTTCAGAATCCAACCTTTTCTAGAAAAAGAACCAAGCAGCTCTGGTGGAAACCAAAACACGACTTGGGAGAAGATTCGGAAGGCTCCCCTTTACATGGAAGAAGCTCAAATCGTGGGCTTTGAAGCACCAAGAGATGAATTGGTTGGTTGGTTGATAGAGGGAAGAGCAGAGCGCACTGTAATCTCTGTGGTAGGAATGGGAGGGCTGGGAAAGACCACTCTTGCCAAGAAAGTTGTTGACAACAATGAGGTGATCGGGTTCTTTGATTGCCATGCGTGGATCACAGTGTCTCAGTCCTATAGTGTTGATGGCCTGTTGAGGGACATGTTGAAGAAGTTTTACAAACAAAAAAATGTGGATCCTCCTCAGAGTATTTCTACAGTGCAAGGAGATTCATTAATAGATGAAGTGAGAAACTACTTGCGCCAAAGGAGGTACGTGATTGTCTTTGATGATGTGTGGGCTGTAAAATTTTGGGATGATATTGAATTTGCTACTCTTGATAGTCAAAATGGAAGTAGGATAATTATGACTACTAGGGACATGAAAGTAGCCGAGTCTTGTAAAAAATCTTCTTTTGTTAAAATACATGAATTAAAACCCCTATCTCCAGCGCAGTCACGGGAACTCTTTTGCAAGAGGGCATTCCAATTTGAATTTAATGGGTATTGCCCAGCAGAATTAGAGCATATATCTTCTGAAATTGTTGAAAAATGTGATGGTTTACCATTAGCATTAGTGGTCATTGCTGGTCTTTTATCCTGCAAAGGTTGGAGGGTTGAAGAGTGGGAAGAGTTTAATCAAAATCTAAATTTAGAGCTGAAGAGAAACGAAAAGTTAGGTAGTATAACAAAGATTTTGAGTTTTAGTTATTACGATTTGTCTCTCAGTCTTAAGTCATGTCTTTTGTATTTTGGAGTATATCCTGAAGACTTTGAAATTAAAGCAAAAGGACTGATTAGGCAATGGATAGCTGAGGGGTTTGTAAAAGATGAAGAGGGGAAAACCTTAGAGAAGGTTGCAGAAGGATATTTAAAAGAATTGATCGATCGAAGTTTGGTGCAAGTATCTTCACTTACGATTGATGGAAAAGTTAGAGGTTGTCGTATTCATGACCTAACACGAGAGTTGATCATTGAAAAATGCAAGGATTTGAGATTTTGTGGTGGCGTACATGATGAGTCAGCGTTAAGTGGCACACATCGACGCCTGTCAATAGAAACCAGTTACTTTGATTTAACGTGTAGCAGTGAAAGCTCACCAGTTCGATCACTTTTCGTTTATGAAAATCAACATTCTGAGGAATTTGCGAGAACACTAACCAAATACAATTTACTGAAGGTGCTTGATGTTGATGATTTTTTCTTGTTTGATTTTTCTGAAAAATTTTGGAATTTAATCCACTTGAAGTATTTGAGGATTGGCATTTCACTGATAGACAGTATTCCAAAATCCATTGCTAAGTTGAGGAACTTGGAGAGCTTGGTTCTACGGAATTGTTATGAGGTTGAGATGCCAGAAGAGATGAGGAAGCTTAGAAAGCTACGACATCTTGAAGTCGGCTCTATGCGTTTGACTCAATTGAAGGATGGTATCGGATGCATGACATCCCTACAAACGCTAAGTGTTGTTAAATTATATGATGATGACGATAATGATGATGATGATGTAGAAGAGCTAATTAGAGGATTGGGAAGGCTAACGCAAATGAGGAAGTTGGGCTTGAAAGGAGTTAGGAAGGAACATGAAAGCGCTCTATCTTCCTCAATAAGTAAGATGAAATACTTGGAAAGCCTAAGTGTGGAGTTCCAATATACAGATGAAGATGAAATCATCAATTTGGAGTTGAATTCAGCGCCACTTATGCTGCGGAAGCTTTACCTATACAATTTTGAGTCGTTGCCAGAGTGGATTCCAAAGCTTCAAAAGCTTGTTAAGTTTACTTTTAGCAATTTCTCAACTAAGGATACAGTGGAGTCAATTAAAGATTTGCCAAATTTGCTGTACCTTGAGCTTATATATTGTGGTGCGATAAGCTTGCATTTTAAAGATGGAGGGTTTCAGAAATTAATGGATCTATTAGAAATTGATACAAATTTCTAG 2523 0.392 MAEPALSLARDHLFSFLMEVGNMIRGVPKDVDDMQNELERIQAIIHDADRVAAAGDDTTREEVKAKVKLLIEAAFTMEDVIDQYVIHQEQEPRDPGCAAFPCHPADLIDTLMLRLQIGYKIQDVKSRVRAFNESSERKSDFRIQPFLEKEPSSSGGNQNTTWEKIRKAPLYMEEAQIVGFEAPRDELVGWLIEGRAERTVISVVGMGGLGKTTLAKKVVDNNEVIGFFDCHAWITVSQSYSVDGLLRDMLKKFYKQKNVDPPQSISTVQGDSLIDEVRNYLRQRRYVIVFDDVWAVKFWDDIEFATLDSQNGSRIIMTTRDMKVAESCKKSSFVKIHELKPLSPAQSRELFCKRAFQFEFNGYCPAELEHISSEIVEKCDGLPLALVVIAGLLSCKGWRVEEWEEFNQNLNLELKRNEKLGSITKILSFSYYDLSLSLKSCLLYFGVYPEDFEIKAKGLIRQWIAEGFVKDEEGKTLEKVAEGYLKELIDRSLVQVSSLTIDGKVRGCRIHDLTRELIIEKCKDLRFCGGVHDESALSGTHRRLSIETSYFDLTCSSESSPVRSLFVYENQHSEEFARTLTKYNLLKVLDVDDFFLFDFSEKFWNLIHLKYLRIGISLIDSIPKSIAKLRNLESLVLRNCYEVEMPEEMRKLRKLRHLEVGSMRLTQLKDGIGCMTSLQTLSVVKLYDDDDNDDDDVEELIRGLGRLTQMRKLGLKGVRKEHESALSSSISKMKYLESLSVEFQYTDEDEIINLELNSAPLMLRKLYLYNFESLPEWIPKLQKLVKFTFSNFSTKDTVESIKDLPNLLYLELIYCGAISLHFKDGGFQKLMDLLEIDTNF* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0221 840 Gene3D Ribonuclease Inhibitor 553 839 IPR032675 -
Apr2g0221 840 Pfam NB-ARC domain 183 431 IPR002182 GO:0043531
Apr2g0221 840 PANTHER - 32 833 - -
Apr2g0221 840 SUPERFAMILY L domain-like 509 833 - -
Apr2g0221 840 Gene3D - 342 430 IPR042197 -
Apr2g0221 840 Pfam Rx N-terminal domain 6 93 IPR041118 -
Apr2g0221 840 CDD RX-CC_like 2 130 IPR038005 -
Apr2g0221 840 Gene3D - 431 522 IPR036388 -
Apr2g0221 840 PRINTS Disease resistance protein signature 200 215 - -
Apr2g0221 840 PRINTS Disease resistance protein signature 280 294 - -
Apr2g0221 840 PRINTS Disease resistance protein signature 379 393 - -
Apr2g0221 840 PRINTS Disease resistance protein signature 627 643 - -
Apr2g0221 840 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 445 IPR027417 -
Apr2g0221 840 Coils Coil 31 51 - -
Apr2g0221 840 Gene3D - 157 336 IPR027417 -
Apr2g0221 840 PANTHER DISEASE RESISTANCE PROTEIN RP 32 833 IPR044974 GO:0006952
Apr2g0221 840 Coils Coil 400 420 - -
Apr2g0221 840 Gene3D - 5 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0221 Apr-Chr2 2790806 2793328 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0221 201 386 WRKY Transcription Factor Family AT5G45050 27.273 2.07e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0221 K13457 - gmx:100819372 740.339