Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0220 ATGGCCGAAACTGCATTGTCCTTGGCTCGTGATCATTTGTTTCCGTTCTTAAAGGAAGTTGGCAACATGATCAGGGGCGTCCCAAAAGATGTTGATGACATGAAAAATGAACTAGAAAGGATTCAAGCCATCATTCATGATGCAGATAGAGTGGCTGCAGCTGGAGACTGTTCCACACGAGAAAAAGTTAAAGCAAAGGTTAAGCTGCTGATAGAAGTAGCTTTTAGCATGGAAGATGTAATTGATGAGTATGTGATCCATCAGGAACAAGAGCCTCGTGATCCTGGATGTGCAGCTTTTCCCTGTCATCCTGCTGACCTCATCGAAACCTTGATGCTTCGTCTTCAAATAGCATATAAGATTCAGGATGTTAAATCACAAGTTCGTGCATTCAACGAAAGCAGTGAAAGGAAGAGTGACTTCAGAATCCAACCTTTTCTAGAAAAAGAACCAAGCAGCTCTAGTGGAAACCAAAACAAGACTTTGGAGAAGATTCGAAAGGCTCCCCTTTACATGGAAGAAGCTCAAATTGTGGGCTTTGAAGCACCCAGAGATGAATTGGTTGGTTGGTTGATAGAGGCAAGAGCAGAGCGCACTGTAATCTCTGTGGTAGGAATGGGAGGGCTGGGAAAGACCACTCTTGCCAAGAAAGTGTTTGACAACAAGGAGGTGATCGGGTTCTTTGATTGCCATGCGTGGATCACAGTGTCTCAGTCCTATACTGTTGATGGCCTGTTGAAGGACATATTGAAGAAGTTTTGCGAAGGAAAACATGTGGATCCTCCTCAAAATATTTCTACAATGGAAGGCGATTCATTGATAGATGGAGTAAGAAACTACTTGAGCAAAAAGAGGTACGTGATTGTCTTTGATGATGTGTGGGCTGTAAACTTTTGGGATGAGATTGAATTTGCTACTCTTGATAGTCAAAATGGAAGTAGGATAATTATGACTACTAGGGACATGAAAGTAGCCGAGTCATGTAAAAAATCTTCTTTTGTTAAAATACATGAATTAAAACCTCTATCTCCAACACAGTCATGGGAACTCTTTTGCAAGAAGGCATTCCAATTTGAATTTAATGGGTATTGCCCAGCAGAGTTAGAGCATATATCTTCTGAGATTGTTGAAAAATATTAG 1140 0.4114 MAETALSLARDHLFPFLKEVGNMIRGVPKDVDDMKNELERIQAIIHDADRVAAAGDCSTREKVKAKVKLLIEVAFSMEDVIDEYVIHQEQEPRDPGCAAFPCHPADLIETLMLRLQIAYKIQDVKSQVRAFNESSERKSDFRIQPFLEKEPSSSSGNQNKTLEKIRKAPLYMEEAQIVGFEAPRDELVGWLIEARAERTVISVVGMGGLGKTTLAKKVFDNKEVIGFFDCHAWITVSQSYTVDGLLKDILKKFCEGKHVDPPQNISTMEGDSLIDGVRNYLSKKRYVIVFDDVWAVNFWDEIEFATLDSQNGSRIIMTTRDMKVAESCKKSSFVKIHELKPLSPTQSWELFCKKAFQFEFNGYCPAELEHISSEIVEKY* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0220 379 CDD RX-CC_like 2 130 IPR038005 -
Apr2g0220 379 Gene3D - 157 336 IPR027417 -
Apr2g0220 379 Coils Coil 31 51 - -
Apr2g0220 379 PANTHER DISEASE RESISTANCE PROTEIN RP 30 378 IPR044974 GO:0006952
Apr2g0220 379 Pfam NB-ARC domain 183 378 IPR002182 GO:0043531
Apr2g0220 379 Gene3D - 5 118 - -
Apr2g0220 379 PANTHER - 30 378 - -
Apr2g0220 379 PRINTS Disease resistance protein signature 200 215 - -
Apr2g0220 379 PRINTS Disease resistance protein signature 280 294 - -
Apr2g0220 379 Pfam Rx N-terminal domain 6 93 IPR041118 -
Apr2g0220 379 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 379 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0220 Apr-Chr2 2774165 2775304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0220 201 351 WRKY Transcription Factor Family AT5G45050 29.412 9.15e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0220 K13457 - gmx:100782760 390.193