Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0217 ATGGAGCAAGTTGCAATGTCCTTCGCTCGTGATCAGGTGCTTCCATACTTAATGGAATTAGCAAATATGATGAGGGGCGTTCCAAAAGATGTTGCAGACATGAAAAATGCACTAGAAAGGATTCAAGCCATCATTCACGATGCAGATAGAGTGGCTGCAGCTGCAGACGACACCACACGGGAAGAAATCAAAGCAAAGATGAAGCTGCTAATAGAAGCTGCTTTCCGCATGGAAGATGCAATTGATGAATATGTGATCCGTGAGGAACAAGAGCCTCGTGATCCTGGATGTGCAGGCTTACCCTGTGAGCCTGCTGACCTCATCAAAACCATGATCCGTCGTTTTCAAATTGCATATAAGATTCAGGATGTTAAATCACGAGTTCGTGCAATCAATGAGAGCAGTCAAAGTAAGAGTGCCTTCCATGTCCAACCTTTTCTAGAACAAGGAACAAGCAGTTCTAGAGGAAACCAAAACACCACTTTGGAGAAGATTCGAAAGGCTCCCCTTTACATGGATGAAGCTCAAATTGTGGGTTTTGAAGCACCCAGAGATGAATTGGTTGGTTGGTTGATAAAGGGAAGAGCAGAGCGCACTGTAATCTCTGTGGTAGGAATGGGAGGACTAGGAAAGACCACTCTTGCCAAGAAAGTTTTTGACAACAAAGAGGTGATTGGACACTTCGATTGCCATGCATGGATCACAGTGTCTCAGTCCTACACTGTGGATGGCCTGTTGAGGGACATGATGCAGATGTTTAACAAAGAAGGAAATGTGGATCCACCTCAGAATATTTCTACAATGCTAGGAAATTTGTTGATAGATGAAGTGAGAAAGTACTTGAGCCAGAAGAGGTATGTTGTTGTCTTTGATGATGTATGGGCTGAAAATTTTTGGGATGAGATTGAATGTGCTACACTTGATAATAAAATTGGAAGTAGGATACTTATCACAACTAGGTACATGAAAGTTGCGGAGTCTTGTAAAGAATTTTCTTATGTTAAAATACATGAATTAAAACCCCTACCTCCAAAACAGTCGTGGGAACTCTTCTGCAAGAGGGCTTTCCAATTTGAATCTAATGGGAATTGTCCAGAAGAATTAGAGCATATATCTTCTGAAATTGTTGAAAAATGTAATGGTTTACCACTAGCATTAGTGGTCATTGCTGGCGTTTTATCTTGCAAAGGATCTAAAGTTGATGAGTGGGAAGAGTTCAGAAAAAATCTAAATTTAGAGCTGCAGAGGAATGAACAATTAGGTAGTATAACAAAGATTTTGAGTTTCAGTTATAACGATTTGCCTTACCATCTTAAATCACCCTTTTTGTATTTTGGAATGTATCCTGAAGACAGCAAAATTAAATCAAAAAGACTAATTTGGCAATGGATTGCTGAAGGGTTTGTAAAATCTGAGGAGGGGAAAACCTTAGAGAAGGTTGCAGAAGGATATTTAAAAGAGTTGATCAGTAGAAGTTTGGTGCAAGTATCTTCACTTACCATTGATGGAAAAGTTAGAGGTTGTCAAGTTCATGACCTAACACGTGAGATGATCCTTAAAAAATGTGAGGATTTGAGATTTTGTCATAGTGTACATGACCTAACTCGACGCCTAGCAATTACAACCAGTTTCAATGATCTAAGAAGTAGTAGTGAAAGCTCACCCATTCGGTCACTTTTTGTTTTCACAGATGAAGAATTATCTGAAGAATTTGTGAGGAGAATACCCACCAAATACATGTTGTTGAAGGTGCTTGATTTTGAAAAAGCTGCATTGCCTTCTGTTCCTGAAAATTTGGGTAATTTAATCCACTTGAAGTATTTAAACCTTGGACTTACAAAGGGAGCAAGTATTCCAAAATCCATTGCTAAGTTGCAGAATTTGGAGACCTTGATTCTAGACGGAGAGAATGGACATGAAATGCCACAGGAGATTAGCAAGCTCAGAAAGCTACGACATCTTAGAGGCTATGCCATATCTTTGATTCAATTGAAGCATAGTATTGGAGGCATGACATCTCTACAAACGCTAGTTTTGGTGAAAATAAATGAGGATGAAGTAGAGCTGATTAAAGAGCTAGGAAGGCTAACACAAATGAGGAAGTTGGGGTTGGTTGGAGTTATCAATGATAATGAAAGCACTCTATGTTCCTCAATAAGTAAGATGCAATACTTGGAAACCCTACTTGTGATATTAAAATGTGGGAATGACATGTTTAATTTGCAGTTTAATTCACCCCCACCTATGCTTAGGAAGCTCTTCCTACACTCACCTTCTGTGAATTTTCCAAAGTGGATTCCAAAGCTTCTAAGGCTTGTGAAGTTGGCCTTTAGAGGCACCAATTTAATTGAGGATCCAATGAAATCACTAGAAAATTTGCCAAATTTGTTGTCCCTTGAGCTTGAATATTATGAAGGTACAAGCTTGCATTTTCAAAATGGGGGGTTTCAGAAACTAAAGGATCTAACACTCTCAGCTATGTGCAACTTGAATTCCATTTGTATTGACAAAGGAGCATTGTGTTCTCTCAAAACATTCAAGTTAGAAGACATCTTGTATCTTAAGGAGGTACCCTCTGGCATCCAATACTTGAAGGAACTTGAAGTGTTACATGAATCAAAAATGTCAGTTGAATTTAATCATAACATTGCTCCCTTTAAAGGACAAAAACACCCAGCCATTCAGCACGTTCCTCTCGTAAAAATTAACAGCAATGGGAGAACCCGTGTTATTCGACACAAAAGGAGACAGAAGGCATAA 2760 0.3909 MEQVAMSFARDQVLPYLMELANMMRGVPKDVADMKNALERIQAIIHDADRVAAAADDTTREEIKAKMKLLIEAAFRMEDAIDEYVIREEQEPRDPGCAGLPCEPADLIKTMIRRFQIAYKIQDVKSRVRAINESSQSKSAFHVQPFLEQGTSSSRGNQNTTLEKIRKAPLYMDEAQIVGFEAPRDELVGWLIKGRAERTVISVVGMGGLGKTTLAKKVFDNKEVIGHFDCHAWITVSQSYTVDGLLRDMMQMFNKEGNVDPPQNISTMLGNLLIDEVRKYLSQKRYVVVFDDVWAENFWDEIECATLDNKIGSRILITTRYMKVAESCKEFSYVKIHELKPLPPKQSWELFCKRAFQFESNGNCPEELEHISSEIVEKCNGLPLALVVIAGVLSCKGSKVDEWEEFRKNLNLELQRNEQLGSITKILSFSYNDLPYHLKSPFLYFGMYPEDSKIKSKRLIWQWIAEGFVKSEEGKTLEKVAEGYLKELISRSLVQVSSLTIDGKVRGCQVHDLTREMILKKCEDLRFCHSVHDLTRRLAITTSFNDLRSSSESSPIRSLFVFTDEELSEEFVRRIPTKYMLLKVLDFEKAALPSVPENLGNLIHLKYLNLGLTKGASIPKSIAKLQNLETLILDGENGHEMPQEISKLRKLRHLRGYAISLIQLKHSIGGMTSLQTLVLVKINEDEVELIKELGRLTQMRKLGLVGVINDNESTLCSSISKMQYLETLLVILKCGNDMFNLQFNSPPPMLRKLFLHSPSVNFPKWIPKLLRLVKLAFRGTNLIEDPMKSLENLPNLLSLELEYYEGTSLHFQNGGFQKLKDLTLSAMCNLNSICIDKGALCSLKTFKLEDILYLKEVPSGIQYLKELEVLHESKMSVEFNHNIAPFKGQKHPAIQHVPLVKINSNGRTRVIRHKRRQKA* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0217 919 PRINTS Disease resistance protein signature 200 215 - -
Apr2g0217 919 PRINTS Disease resistance protein signature 280 294 - -
Apr2g0217 919 PRINTS Disease resistance protein signature 379 393 - -
Apr2g0217 919 PRINTS Disease resistance protein signature 814 830 - -
Apr2g0217 919 Gene3D Ribonuclease Inhibitor 555 905 IPR032675 -
Apr2g0217 919 Gene3D - 161 335 IPR027417 -
Apr2g0217 919 SUPERFAMILY L domain-like 509 900 - -
Apr2g0217 919 Gene3D - 431 522 IPR036388 -
Apr2g0217 919 PANTHER - 35 878 - -
Apr2g0217 919 Pfam NB-ARC domain 183 433 IPR002182 GO:0043531
Apr2g0217 919 Gene3D - 342 430 IPR042197 -
Apr2g0217 919 Gene3D - 4 118 - -
Apr2g0217 919 Pfam Rx N-terminal domain 5 93 IPR041118 -
Apr2g0217 919 PANTHER DISEASE RESISTANCE PROTEIN RP 35 878 IPR044974 GO:0006952
Apr2g0217 919 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 445 IPR027417 -
Apr2g0217 919 Coils Coil 400 420 - -
Apr2g0217 919 CDD RX-CC_like 4 133 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0217 Apr-Chr2 2746318 2750710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0217 201 386 WRKY Transcription Factor Family AT5G45050 29.843 4.61e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0217 K13457 - gmx:100819372 842.417