Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0212 ATGGAAGCTACATGCAATCACAGCTCTAATATTGCTGAAGTTTCACATTCTTCTCCAATGATGTCCTTTAATGGCAAACGACTAGTTGCGGATGAGATGGATTTCTTTGTGGAGAAGAAGAAGAAGAAAAGTGTAGTTGATGATGATCAAATGGTGCACCAAAAGGAGCTTTATGTGGATACTCGTTTAGATCTCGTTACAAAGAGTTCAGTTGGCAACAAATCAATTGAGGAAGCTGGATCATCGGTGGCAAGGGATAATGATAAGAGAAATAAGGTAACTTTGCTGGCTGAATTGCACCAGCTGAATGCTGAAAATCAACGCTTGAGGGAGCTGATTGATGAAGTGAGCAATAACTACAATGCCCTACACGAGCGTCTTATGAAGCTGATGCAGAAACAGCATAAGAATGAGACTAACAAAGCCAAAGAGGAAGAGGGCAAGAAAGATGGTATGATTCCAAGGCCACTCTTGGATATTGGAATTGCTATTAAGGAAGAGCCTTCACAGCAATATTCAGAGGGAAAACTGAGAGAAAGCAAAAACATGGTTGACTTAATGGAGAGCAAGACTCAAAAGACTTGCACCACTAGAGATGTTGTTGAGTTGGATTCTGGCAAGGATGATAGTGCAAAATCCAGAAGAGATATTCACCAGAGTCCATCCGACAAAGCAATTATGGGGTGGCCGTCAAATGAAGTCACAAGATTGAGTTCTTTTAGGGATGTTGATCAACCATCAGAAACCATGTCAATGATCAAGAAAGCTCGTGTATCTGTTCGAGCAAGATCAGATTCTTCTATGATTTCAGATGGATGTCAATGGCGAAAGTATGGGCAGAAGATGGCGAAAGGAAATCCTTGTCCACGAGCTTATTATCGTTGTACAATGGGGACTGGTTGTCCAGTTCGAAAACAAGTACAAAGGTGTGCTGAAGATCAAAGTGTGTTGATCACAACATATGAGGGGCAGCATAATCATGTGCTCTCTCCCACTGCAAAGGCAATGGCATCAACCACATCAGCAGCTGCATCAATGCTTCTTTCAGGATCAATGCCAAGCTCAGATAATGGCCTAATGCATCCAAACATATTAGAAAGTGCAGCACTTTCTTGCTCACACAACTTGGCAACACTCTCAGCTTCAGCTCCATTTCCAACCATCACATTGGATCTCACTACTCAAAGTGCTACCAATAATTCCTCTCAAGTTTTGGCACACAAGTTTATGTCAGGTCCTAACATTTTTGACCAAACTAAGCTTTTTAAGTTATATGGGTCACAGGCAACAGAAACAGCTTCATTTGTTGATAAGGTAAATGCAGCAGCAGCTGCTATCACTGCAGACCCTAAATTAACAGCAGCTCTTGTGGCTGCCATAACATCTGTCATGGGAAGTTCACATCAAAACAATAATAATGGTGCCAATGGTACAAGTGGAGACCCAGCGGTGCAATGA 1458 0.4198 MEATCNHSSNIAEVSHSSPMMSFNGKRLVADEMDFFVEKKKKKSVVDDDQMVHQKELYVDTRLDLVTKSSVGNKSIEEAGSSVARDNDKRNKVTLLAELHQLNAENQRLRELIDEVSNNYNALHERLMKLMQKQHKNETNKAKEEEGKKDGMIPRPLLDIGIAIKEEPSQQYSEGKLRESKNMVDLMESKTQKTCTTRDVVELDSGKDDSAKSRRDIHQSPSDKAIMGWPSNEVTRLSSFRDVDQPSETMSMIKKARVSVRARSDSSMISDGCQWRKYGQKMAKGNPCPRAYYRCTMGTGCPVRKQVQRCAEDQSVLITTYEGQHNHVLSPTAKAMASTTSAAASMLLSGSMPSSDNGLMHPNILESAALSCSHNLATLSASAPFPTITLDLTTQSATNNSSQVLAHKFMSGPNIFDQTKLFKLYGSQATETASFVDKVNAAAAAITADPKLTAALVAAITSVMGSSHQNNNNGANGTSGDPAVQ* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0212 485 Coils Coil 85 148 - -
Apr2g0212 485 SUPERFAMILY WRKY DNA-binding domain 262 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g0212 485 MobiDBLite consensus disorder prediction 202 221 - -
Apr2g0212 485 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 473 IPR044810 GO:0003700
Apr2g0212 485 Gene3D WRKY domain 254 330 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr2g0212 485 Pfam WRKY DNA -binding domain 271 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g0212 485 MobiDBLite consensus disorder prediction 202 228 - -
Apr2g0212 485 ProSiteProfiles WRKY domain profile. 264 330 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr2g0212 485 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 15 473 - -
Apr2g0212 485 SMART WRKY_cls 269 329 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0212 Apr-Chr2 2702715 2708826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0212 27 476 WRKY Transcription Factor Family AT1G62300 39.839 2.72e-91 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr2g0212 WRKY 6.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0212 - - gmx:100779533 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0212 2 2702715 2708826 Apr9g1764 9 26680691 26683807 PCT