Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0208 ATGACCAATTTGCCCCAGTCGCTGTCTATGGGCGCTGCCTTCGGCGCCGGCGCTCCTCCGCCGCCCTCGCCCAATGCTTCCTCCGCCCAAGGCTCCGCCGCTACCAAGGATCGCAAGATGGCTTCGGCGGAGCAGCTTGTTCTCGAGCTCAGTAACCCTGAACTCCGTGAAAATGCTCTTCTCGAACTCTCTAAGGAAATAGTTTCAATATATCCTGTTCTTTCTCCACCAAATCTTACCCCCGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTAGCATCTCACCCTGACACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGCAAATCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCATTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAGATAATTCCTCTGTGCTTGCGCACCATGGAAATGGGTAGTGAACTATCAAAAACAGTTGCAACATTTATTGTTCAAAAAATTCTGTTGGATGATGTGGGCTTGGACTACATTTGTACTACAGCTGAGCGCTTTTTTGCGGTAGGTCGAGTTTTGGGAAACATGGTGGCAGCTCTTGCTGAGCAACCCTCATCTCGTCTTTTGAAGCATATCATTCGATGCTATCTTCGCCTGTCTGATAATCCAAGGGCCTGTGATGCATTAAGAAGCTGTCTGCCCGACATGTTAAGAGATGCTACTTTCAGCAGTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATCGTGTTCCTGCACTGCAAGCTGGAGGAGGTTTCGATCATATGATTGTGACCTGA 903 0.4707 MTNLPQSLSMGAAFGAGAPPPPSPNASSAQGSAATKDRKMASAEQLVLELSNPELRENALLELSKEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0208 300 PANTHER UNCHARACTERIZED 64 298 - -
Apr2g0208 300 PANTHER UNCHARACTERIZED 1 65 - -
Apr2g0208 300 SUPERFAMILY ARM repeat 51 255 IPR016024 -
Apr2g0208 300 MobiDBLite consensus disorder prediction 1 36 - -
Apr2g0208 300 PANTHER BNAA05G20110D PROTEIN 1 65 - -
Apr2g0208 300 PANTHER BNAA05G20110D PROTEIN 64 298 - -
Apr2g0208 300 Pfam Cell differentiation family, Rcd1-like 65 280 - -
Apr2g0208 300 Gene3D - 34 281 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0208 Apr-Chr2 2654374 2667667 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Apr2g0208 Rcd1 8.2e-111 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0208 K12606 - gmx:100784529 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0208 2 2654374 2667667 Apr2g0208 2 2654374 2667667 ECH
Apr2g0208 2 2654374 2667667 Apr9g1761 9 26647246 26651414 PCT