Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0197 ATGGGGAAACTTACCAAGGCAGAGAAGAAGGTCGCTTACGATTCCAAGCTGTGCCAACTCCTTGATGACTACACTCAGATCCTCGTCGTCAATGCTGACAATGTCGGATCCAACCAACTCCAGAACATCCGCAAGGGTCTCCGTGGTGATTCAATCGTCCTCATGGGGAAGAACACTATGATGAAGCGCTCTGTTCGCATGCACGCAGAGAAAACCGGCAATGATGTCTATCTCAGTCTTATCCCCCTCCTTGTCGGCAATGTTGGATTGATTTTCACTAAGGGTGACTTGAAAGAGGTTAGCGAGGAGGTTGCTAAGTACAAGGTGGGAGCACCAGCTCGTGTTGGTTTGGTTGCTCCAATTGACGTTGTTGTTCCTCCAGGAAACACAGGACTTGATCCCTCTCAGACCTCTTTCTTCCAGGTGCTTAATATTCCCACCAAAATTAACAAGGGAACGGTAGAAATTATAACCCCGGTCGAACTCATTAAGAAGGGAGACAAAGTGGGCTCTTCTGAAGCCGCTTTGCTGGCCAAGCTTGGCATAAGGCCCTTCTCATATGGCCTTGTTGTTCTGTCAGTGTATGATAATGGGTCAGTTTTTAGCCCAGAGGTTCTTGATCTTACCGAGGATGACCTCGTTGAGAAGTTTGCTGTTGGTGTCTCAATGGTTACTTCTCTTTCATTGGCCGTCTCGTACCCAACACTTGCAGCTGCACCGCATATGTTTGTGAACGCCTACAAGAATGTCCTTGCTCTCGCAGTTGAGACAGATTACTCTTTCCCTGAGGCAGACAAGGTTAAAGAGTACCTCAAGGATCCAAGCAAATTTGCTGTGGCTGCTGTTGCTGCTCCTGCTGCCGATTCTGGTGCTGGCCCAGCTGCTGCTGCCAAGGAAGAGGAGAAGAAGGAAGAGCCAGCGGAAGAGTCTGATGATGACATGGGTTTCAGTCTTTTTGACTAG 963 0.487 MGKLTKAEKKVAYDSKLCQLLDDYTQILVVNADNVGSNQLQNIRKGLRGDSIVLMGKNTMMKRSVRMHAEKTGNDVYLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFAVGVSMVTSLSLAVSYPTLAAAPHMFVNAYKNVLALAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAADSGAGPAAAAKEEEKKEEPAEESDDDMGFSLFD* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0197 320 PIRSF L10E 1 320 IPR030670 GO:0042254
Apr2g0197 320 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 3 320 - -
Apr2g0197 320 CDD Ribosomal_P0_L10e 8 184 - -
Apr2g0197 320 Gene3D - 5 208 IPR043141 -
Apr2g0197 320 Gene3D - 113 184 IPR043164 -
Apr2g0197 320 Pfam Insertion domain in 60S ribosomal protein L10P 113 182 IPR040637 -
Apr2g0197 320 SUPERFAMILY Ribosomal protein L10-like 7 133 IPR043141 -
Apr2g0197 320 MobiDBLite consensus disorder prediction 286 320 - -
Apr2g0197 320 MobiDBLite consensus disorder prediction 305 320 - -
Apr2g0197 320 Pfam Ribosomal protein L10 6 107 IPR001790 -
Apr2g0197 320 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 3 320 - -
Apr2g0197 320 Pfam 60s Acidic ribosomal protein 233 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0197 Apr-Chr2 2568187 2570009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0197 3 319 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 82.650 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0197 K02941 - gmx:100777482 537.724