Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0183 ATGGTTGATTTGGAAATTCAAGTTCCCACCCCATTTGATCCATTTGCTGAGGCTAGAGAATCTGATGCCCCCGGAGCCAAAGAGTATGTTCATATACGAATTCAGCAAAGGAATGGAAAAAAGAGCCTAACCACAGTGCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTCAAAGACCTTAAAAAAGAGTTTTGTTGCAACGGCAATGTTGTGCAAGACAAGGAACTTGGCAAGATAATTCAACTCCAAGGTGATCAACGCAAGAAAGTTTCTCAGTTTCTTGCTCAAGCTGGTCTTGTTAGGAAGGACCAAATTAAGATTCATGGTTTTTGA 339 0.4159 MVDLEIQVPTPFDPFAEARESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLAQAGLVRKDQIKIHGF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0183 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Apr2g0183 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Apr2g0183 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Apr2g0183 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Apr2g0183 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Apr2g0183 112 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 112 - -
Apr2g0183 112 Gene3D - 1 112 - -
Apr2g0183 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - -
Apr2g0183 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0183 Apr-Chr2 2471076 2472377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0183 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 83.929 1.16e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0183 K03113 - gmx:100791423 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0183 2 2471076 2472377 Apr2g0183 2 2471076 2472377 ECH