Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0182 ATGGGTTCTTGTCTAAGTAAAGGTAAAGATTCTGAGCCAGAACACAATGGTTATAGACAAGCTGGGTCTGGTGGTGTTCACAACCAGAAGACTCATGAACCTTTGGTCAACCAATCAAGAGTACCTGCAAATCAGCCTTATCAGTTACCTGAAAAGCATGCTGCATCAACTACTCAAACAGTGCCTCAGACACCATGGAAGCCTTCTGTTCCTGCACCAAGTCCAAAACCTGTTAAGCAAGACACAATCCTTGGGAAGCAATTTGAGGATGTGAAACAGTTCTATACACTTGGGAAGGAATTGGGTAGAGGGCAATTTGGGGTAACATATCTATGCACTGAGAATTCAACTGGGTTGCAGTATGCTTGCAAGTCCATTTCAAAGAGGAAACTTGTAAGCAAATCTGATAAAGAAGATATAAAGAGGGAGATTCAGATTATGCAGCATTTGAGTGGTCAACCAAACATTGTTGAGTTCAAAGGTGCTTATGAGGATAAGCATTCAGTTCATGTTGTGATGGAGCTTTGTGCAGGTGGTGAACTTTTTGATAGGATTATTGCTAAGGGGCATTATAGTGAAAGAGCTGCTGCATCAATATGCAGACAAATTGTTAATGTTGTTCATATCTGCCATTTCATGGGTGTGATGCACAGGGATCTTAAGCCAGAGAATTTCTTGTTATCTAGTAAGGATGAAAATGCACTTCTCAAGGCAACTGATTTTGGCTTGTCCGTTTTCATTGAAGAAGGAAAGGTGTATAGAGATATAGTTGGGAGTGCTTACTATGTTGCTCCAGAAGTTCTACGCCGTAGATGTGGGAAGGAAATAGATATATGGAGTGCAGGAGTCATATTGTATATCCTACTCAGCGGTGTCCCTCCATTTTGGGCTGTTAGTTGTCTAACTTTTTTTAATCAAATATGTGCTGTAGAGACTGAAAAGGGAATATTTGATGCCATATTGGAAGGTCATATTGATTTTGAAAGTCAACCGTGGCCTAAAATTTCAAGCAATGCCAAGGATCTTGTTCGAAAGATGCTTATACAGGATCCAAAGAAACGCATTACCTCTGCTCAAGTTCTTGAACACCCGTGGATTAAAGATGGAAATGCTCCAGACAAGCCAATAGACAGTGCAGTCCTTTCCAGAATGAAGCAATTCAGAGCTATGAATAAACTAAAGAAACTTGCCCTGAAGGTCATTGCTGAGAACATGTCTGCAGAAGAGATCCAAGGTTTGAAGGCAATGTTTACAAATATGGACACTGACAAGAGTGGTACAATCACCTATGAAGAACTGAAAGCAGGATTGCAAAGACTTGGCTCAAAGCTTACTGAGGCTGAAGTGAAGCAGCTTATGGAAGCTGTAAGCTATTTTTTTGCTGATGTTGATGGAAATGGCTCAATTGACTATATAGAATTCATTACTGCTACAATGCATAGACACAAGTTAGAAAGAGATGATCAACTTTTCAAGGCCTTCCAATATTTTGATAAAGACAACAGTGGGTATATTACAAGAGATGAATTGGAAACAGCCATGAATGAATATGGTATGGGTGATGAAGCCACAATCAAGGAAATTATATCTGAAGTTGATACAATTATATCTGAAGATGGTAGAATCAACTATGACGAATTCTGTGCAATGATGAGGAGTGGAAATCAGCAAGCCAAGCTATTCTAA 1686 0.3968 MGSCLSKGKDSEPEHNGYRQAGSGGVHNQKTHEPLVNQSRVPANQPYQLPEKHAASTTQTVPQTPWKPSVPAPSPKPVKQDTILGKQFEDVKQFYTLGKELGRGQFGVTYLCTENSTGLQYACKSISKRKLVSKSDKEDIKREIQIMQHLSGQPNIVEFKGAYEDKHSVHVVMELCAGGELFDRIIAKGHYSERAAASICRQIVNVVHICHFMGVMHRDLKPENFLLSSKDENALLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRCGKEIDIWSAGVILYILLSGVPPFWAVSCLTFFNQICAVETEKGIFDAILEGHIDFESQPWPKISSNAKDLVRKMLIQDPKKRITSAQVLEHPWIKDGNAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENMSAEEIQGLKAMFTNMDTDKSGTITYEELKAGLQRLGSKLTEAEVKQLMEAVSYFFADVDGNGSIDYIEFITATMHRHKLERDDQLFKAFQYFDKDNSGYITRDELETAMNEYGMGDEATIKEIISEVDTIISEDGRINYDEFCAMMRSGNQQAKLF* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0182 561 SUPERFAMILY EF-hand 405 552 IPR011992 -
Apr2g0182 561 ProSitePatterns EF-hand calcium-binding domain. 498 510 IPR018247 -
Apr2g0182 561 SMART efh_1 524 554 IPR002048 GO:0005509
Apr2g0182 561 SMART efh_1 489 517 IPR002048 GO:0005509
Apr2g0182 561 SMART efh_1 412 440 IPR002048 GO:0005509
Apr2g0182 561 SMART efh_1 448 481 IPR002048 GO:0005509
Apr2g0182 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 556 - -
Apr2g0182 561 SUPERFAMILY Protein kinase-like (PK-like) 94 387 IPR011009 -
Apr2g0182 561 MobiDBLite consensus disorder prediction 1 80 - -
Apr2g0182 561 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 45 556 - -
Apr2g0182 561 ProSiteProfiles EF-hand calcium-binding domain profile. 485 520 IPR002048 GO:0005509
Apr2g0182 561 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Apr2g0182 561 MobiDBLite consensus disorder prediction 22 65 - -
Apr2g0182 561 Pfam EF-hand domain pair 488 552 IPR002048 GO:0005509
Apr2g0182 561 Pfam EF-hand domain pair 413 478 IPR002048 GO:0005509
Apr2g0182 561 SMART serkin_6 95 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0182 561 Gene3D - 376 557 - -
Apr2g0182 561 Pfam Protein kinase domain 95 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0182 561 CDD EFh 489 552 IPR002048 GO:0005509
Apr2g0182 561 ProSitePatterns EF-hand calcium-binding domain. 462 474 IPR018247 -
Apr2g0182 561 CDD EFh 413 477 IPR002048 GO:0005509
Apr2g0182 561 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Apr2g0182 561 Gene3D Phosphorylase Kinase; domain 1 97 180 - -
Apr2g0182 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Apr2g0182 561 Coils Coil 430 450 - -
Apr2g0182 561 ProSiteProfiles Protein kinase domain profile. 95 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0182 561 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Apr2g0182 561 CDD STKc_CAMK 94 365 - -
Apr2g0182 561 Gene3D Transferase(Phosphotransferase) domain 1 181 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0182 Apr-Chr2 2464194 2469435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0182 1 561 EF-hand Containing Proteins AT3G20410 71.781 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr2g0182 Pkinase 7.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0182 K13412 - gmx:100798651 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0182 2 2464194 2469435 Apr9g1743 9 26525060 26529492 ECH
Apr2g0182 2 2464194 2469435 Apr2g0182 2 2464194 2469435 ECH