Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0180 ATGATAGGAGCAACAACAAGGTGTAAGGAAGTTTTTTCTACGTGGGTTTTGGCTGGCTGTGGTGGTTATGCATTTGAGCTTTTCATGAAAGTTGTAGAGAGAGTCGTTTTTGCAGAATTCACATGCATTCTGGCACTAGGAGGGTCCATAATGGGAATAATTGCAGGAGCAATCAAAGGGCAAACCACAGAAGCTGGTTTTCTAGATGGGGCTGGGAAAGGAGCTGTGACAGGAGCCATTGCAGCACTACAATTGCTAAATTTTTCTGCTGTTAATGATTCAATGTCAAAGGTTGACCTGCTGAGGAGTTTGTTAAATGGAGAGGTATTTATGGAATGGATATGTCCAGCTGTTGCACAAGCCTATCAGTGTCATATGAATGCACAAGGAACAACTTATACACAACTATCAGATATTTATTATGACATTACCAGGGGAGTCAACATCAAAGGGATTGCCCATAATATTATTCAAAAGCTTCCCGTTCATCAATTCAATTCCACCAAAATGTTGAAACTATACAATGAATCATGCTGCTCAATTTGCTTTCAAGATTTCGAGGATGGAGAATTTATCAGAATACTTCCAAATTGTGGCCACTTTTTTCACTTAGTGTGCATAGACAAATGGCTAGTTCAACAAGGATCATGTCCCATGTGTAGAACTTATGTTCCATATTTATGA 684 0.3933 MIGATTRCKEVFSTWVLAGCGGYAFELFMKVVERVVFAEFTCILALGGSIMGIIAGAIKGQTTEAGFLDGAGKGAVTGAIAALQLLNFSAVNDSMSKVDLLRSLLNGEVFMEWICPAVAQAYQCHMNAQGTTYTQLSDIYYDITRGVNIKGIAHNIIQKLPVHQFNSTKMLKLYNESCCSICFQDFEDGEFIRILPNCGHFFHLVCIDKWLVQQGSCPMCRTYVPYL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0180 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 141 226 IPR013083 -
Apr2g0180 227 SMART ring_2 179 220 IPR001841 -
Apr2g0180 227 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 4 224 IPR044523 -
Apr2g0180 227 CDD RING-H2_PA-TM-RING 178 221 - -
Apr2g0180 227 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 224 - -
Apr2g0180 227 Pfam Ring finger domain 179 221 IPR001841 -
Apr2g0180 227 ProSiteProfiles Zinc finger RING-type profile. 179 221 IPR001841 -
Apr2g0180 227 SUPERFAMILY RING/U-box 170 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0180 Apr-Chr2 2432009 2434663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0180 38 224 C3H Transcription Factor Family AT5G66070 35.204 8.56e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0180 - K19041 gmx:100799697 319.701
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0180 2 2432009 2434663 Apr2g0180 2 2432009 2434663 ECH