Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0170 ATGAGTGTGGTGGGGTTTGACATTGGTAATGAGAACTGTGTCATTGCTGTTGTTAGGCAACGTGGGATTGATGTTTTGTTGAATTATGAATCCAAACGTGAAACCCCTGCAGTGGTCTGCTTTGGCGAGAAGCAGCGGTATTTGGGATCTGCTGGTGCTGCTTCTGCTATGATGCACCTCAAGTCTACTATATCTCAAATAAAGAGACTGATAGGAAGGAGATTTGTGGATCCTGATGTGGAAAAAGAGCTGAAAATGCTCCCTGTTGAAACTTCTGAGGGATCAGATGGTGGCATTTTGATTCATTTGAAATACTTGGGGGAGATTCATGTGTTTACACCTGTTCAAATAATGTCTATGCTCTTTGCTCACTTGAAGACTCTGACCGAGAAAAATTTGGAGACACCTGTTTCGACTTGTGTTATTGGGATCCCATCATACTTCACTGACTTGCAGAGACGGGCATATCTTGATGCTGCAAAAATTGCTGGATTGAATCCGTTGAGGTTGATCCATGATTGTACTGCAACTGCCCTTAGTTATGGAATTTATAAAACAGATTTTCGTGCTGCAGGTCCAGTTTATGTTGCATTCATTGACATTGGTCATTGTGATACTCAGGTTTCTATTGCGTCGTTTGAGTTTGGTCAAATGACGATACTTTCACATGCTTTTGACAGTAGCTTGGGGGGAAGAGACTTTGATGAGGTTCTATTTAGCCATTTTGCAGCAAAATTCAAGGAAGAGTACTGCATTGATGTGTATTCTAATGCCAAGGCATGTATCAGGCTACGTGCAGCATGTGAAAAATTGAAGAAAGTGTTGAGTGCAAATCTAGAGGCACCTCTAAATATTGAGTGCTTGATGGATGAGAAAGACGTTAAGGGCTTTATTACAAGGGAAGAATTTGAGAAGCTGGCATCAGGATTATTGCAGAGAATTTCTATTCCTTGCAGCAGAGCATTAACTGATGCAGAGTTGACAGCAGAGAAGATTTCTTCTGTAGAGCTAGTTGGTTCAGGTTCAAGGATTCCAGCTATAAGCACATTGCTAACTTCTCTATTCAAGAAAGAACCCAGCCGACAACTGAATGCAAGTGAGTGTGTAGCACGAGGTTGTGGTTTACAGTGTGCTATGCTTGGTCCTGTTTACCGTGTGAGAGAATATGAGGTTCAGGATGCAATTCCTTTTTCAATTGGACTTTCATCAGATGAAGGTCCAATTTTTGCAGGATCAAACAGTGTACTTTTCCCAAGAGGCCAACCCTTTCCAAGTGTTAAAGTCATAACATTTCAGCGAAATAATTTGTTCCATTTGAAAGCTTTCTATGCTAATCCAAATGAACTACCACCTGGGACATCTCCTAAAATTAGTTGCTTCACGATTGGTCCTTTCCATGGATCCAATGGTAGTAAAACCAGAGTTAAAGTTAAAGTTGTACTAAATCTGGATGGCATTGTCAGTATTGAATCAGCTACAGTAAGTAAGAAGCCTTATTTTACTTTCTGTATTGTGTTATTAGTTTTTCTTAGTGATCTAACCTTTCTATGGTTTCAGTTGATCAAAGATCACATGAATGATTCAGTTATGGTGGGCGATCATCATTCAAATTTTGATGCAATGGATGTTGATCCCATTTCTGAGACAGTTGCCAATGGCTTTGAAGATAATACCAATAAGAAGTTGGAATCTCCACGTAGTTCTGCTGATAGTACAAGAAAAGATAAAGTTAACAGAAGGATTCATGTGCCAGTAAATGAGAGTATCTCTGGTGGACTAACAAAGGCGGAGATCTCAGAAGCTCTAGATAAAGAACTTCAGTTGGCCCAACAAGACAGAATTGTAGAGCGAACCAAAGAGAAGAAGAATACCTTGGAGTCCTACGTCTATGATATGAGGAATAAGCTCTTCAACACATACCGGAGTTTTGCAAGCGAGCAAGAGAGGGATGACATATCTCAAAGCCTTCAAGAGACTGAGGAGTGGCTTTATGAGGATGGTGTTGATGAAACTGAACATGCTTATTCTTCAAAACTGGAGGATCTTAGAAAGCTGGTGGATCCAATTGAGAATCGGTATAAAGATGAAAAAGAAAGAGTGCAGGCTATAAGTGATTTATCAACTTGCATTTCACAGCATCGTGCATCCGCAGATTCCCTTCCACCCCAGGGTAAAGAACTGATCATCAATGAGTGCAATAAAGTAGAGCAGTGGCTGCGAGAGAAGATCCAGCAACAAGAATCTTTTCCTAAGAATACTGACCCAATATTATGGTCAAGTGATATTAAGAGCAAGATACAGGAGTTAAACTTGATATGCCAACAGATATTGGGATCCAAGGCTTCTTCAACTCCAGAAGACAGGGAGAATTTTGGTCCTAGCAGAGAGTGA 2391 0.4049 MSVVGFDIGNENCVIAVVRQRGIDVLLNYESKRETPAVVCFGEKQRYLGSAGAASAMMHLKSTISQIKRLIGRRFVDPDVEKELKMLPVETSEGSDGGILIHLKYLGEIHVFTPVQIMSMLFAHLKTLTEKNLETPVSTCVIGIPSYFTDLQRRAYLDAAKIAGLNPLRLIHDCTATALSYGIYKTDFRAAGPVYVAFIDIGHCDTQVSIASFEFGQMTILSHAFDSSLGGRDFDEVLFSHFAAKFKEEYCIDVYSNAKACIRLRAACEKLKKVLSANLEAPLNIECLMDEKDVKGFITREEFEKLASGLLQRISIPCSRALTDAELTAEKISSVELVGSGSRIPAISTLLTSLFKKEPSRQLNASECVARGCGLQCAMLGPVYRVREYEVQDAIPFSIGLSSDEGPIFAGSNSVLFPRGQPFPSVKVITFQRNNLFHLKAFYANPNELPPGTSPKISCFTIGPFHGSNGSKTRVKVKVVLNLDGIVSIESATVSKKPYFTFCIVLLVFLSDLTFLWFQLIKDHMNDSVMVGDHHSNFDAMDVDPISETVANGFEDNTNKKLESPRSSADSTRKDKVNRRIHVPVNESISGGLTKAEISEALDKELQLAQQDRIVERTKEKKNTLESYVYDMRNKLFNTYRSFASEQERDDISQSLQETEEWLYEDGVDETEHAYSSKLEDLRKLVDPIENRYKDEKERVQAISDLSTCISQHRASADSLPPQGKELIINECNKVEQWLREKIQQQESFPKNTDPILWSSDIKSKIQELNLICQQILGSKASSTPEDRENFGPSRE* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0170 796 MobiDBLite consensus disorder prediction 554 577 - -
Apr2g0170 796 SUPERFAMILY Actin-like ATPase domain 193 380 IPR043129 -
Apr2g0170 796 Gene3D - 5 374 - -
Apr2g0170 796 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Apr2g0170 796 PANTHER HSC70CB, ISOFORM G-RELATED 1 494 - -
Apr2g0170 796 PANTHER HSC70CB, ISOFORM G-RELATED 520 787 - -
Apr2g0170 796 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 498 IPR029047 -
Apr2g0170 796 Gene3D - 38 113 - -
Apr2g0170 796 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 494 - -
Apr2g0170 796 PANTHER HEAT SHOCK 70 KDA PROTEIN 520 787 - -
Apr2g0170 796 MobiDBLite consensus disorder prediction 559 577 - -
Apr2g0170 796 Gene3D Actin; Chain A, domain 4 230 313 - -
Apr2g0170 796 CDD HSPA4_like_NDB 2 380 - -
Apr2g0170 796 PRINTS 70kDa heat shock protein signature 2 15 - -
Apr2g0170 796 PRINTS 70kDa heat shock protein signature 30 42 - -
Apr2g0170 796 PRINTS 70kDa heat shock protein signature 140 160 - -
Apr2g0170 796 PRINTS 70kDa heat shock protein signature 332 348 - -
Apr2g0170 796 PRINTS 70kDa heat shock protein signature 363 383 - -
Apr2g0170 796 PRINTS 70kDa heat shock protein signature 388 407 - -
Apr2g0170 796 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 594 693 IPR029048 -
Apr2g0170 796 Pfam Hsp70 protein 3 495 IPR013126 GO:0005524|GO:0140662
Apr2g0170 796 Pfam Hsp70 protein 580 693 IPR013126 GO:0005524|GO:0140662
Apr2g0170 796 Gene3D - 593 704 IPR029048 -
Apr2g0170 796 Coils Coil 679 699 - -
Apr2g0170 796 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 626 IPR029047 -
Apr2g0170 796 Gene3D - 186 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0170 Apr-Chr2 2282828 2289346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0170 591 689 Calmodulin-binding Proteins AT1G16030 30.000 3.28e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0170 2 2282828 2289346 Apr2g0170 2 2282828 2289346 ECH