Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0141 ATGAGTTGCTTTTCATGTTGTACGTCCCAAGAGAGGATCAACAAAAAGTCATTGAAGAAAAGCGTTAAGGAATGTCATGAAGCAAAAGCTCTAGCTTCATTTGGCAACATCTCTTTAAAAACAGATAGTGGGAAGAAAAAGTTCATAGCAGAAGAGATAACAAAGCTTGGTAAAGGAAATATTACCTCAAAGAATTTTTCTTACCGTGAATTATGTGCTGCAACTCAAAACTTTCACCCTGCCAATATGATTGGTGAAGGAGGCTTTGGGAGGGTATACAAAGGACACCTTAAAGACACAAATCAAGTTGTTGCTGTGAAGCAACTTGACAGGAATGGATTTCAAGGGAACAGGGAATTTCTTGTAGAGGTTTTGATTTTGAGTCTTTTGCACCACCCTAACCTTGTCAACTTGGTAGGGTATTGTGCTGAAGGGGATCAGAGGATTTTGGTGTATGAATACATGGTCAATGGTTCTTTAGAAGATCACTTACTTGAATTAACTCCAGAAAGAAAGCCTTTGGACTGGCACACCAGAATGAAAATTGCTGTAGGTGCAGCAAAAGGACTTGAATATTTGCATGAAGTAGCAGACCCACCTGTGATATACCGAGATTTCAAAGCATCAAACATACTACTAGATGAAAACTTTAATCCAAAGCTCTCTGATTTTGGACTTGCAAAGCTTGGTCCAACTGGAGATAAAACACATGTATCCACCAGGGTGATGGGAACATATGGCTATTGTGCTCCTGAGTATGCATCAACAGGTCAATTGACTACAAGATCAGATGTGTACAGTTTTGGAGTAGTCTTTTTGGAGATGATCACAGGAAGAAGAGTGATTGACAATTCAAGAGTATCAGAAGAGCAAAATTTAGTCATTTGGGCACAACCACTCCTCAAAGACAGAAGAAAATTTACACAAATGGCTGATCCATTGCTAGAAGAAAAGTATCCTATAAAAAGTCTATACCAAGCTCTAGCAGTAGCAGCAATGTGTCTCCAAGAAGAAGCTGAAACCCGACCTTTGATCAGTGATGTAGTTACAGCTATTGAATTTTTAGCAAGGAAGAAAGTAGAAGTGGATGAAGATGAACTACACTCTATAAAAGAAACTTCTCCTGAGAATGGAGATAGCAGTGAAAACAGTGAATCTGATGTTGATGAAGAAGAGAAAGAGAACACTAAGAAAAAGGAGGAGAAGAATGGTGATGATATCAACAACAAAGAATAG 1236 0.3859 MSCFSCCTSQERINKKSLKKSVKECHEAKALASFGNISLKTDSGKKKFIAEEITKLGKGNITSKNFSYRELCAATQNFHPANMIGEGGFGRVYKGHLKDTNQVVAVKQLDRNGFQGNREFLVEVLILSLLHHPNLVNLVGYCAEGDQRILVYEYMVNGSLEDHLLELTPERKPLDWHTRMKIAVGAAKGLEYLHEVADPPVIYRDFKASNILLDENFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYASTGQLTTRSDVYSFGVVFLEMITGRRVIDNSRVSEEQNLVIWAQPLLKDRRKFTQMADPLLEEKYPIKSLYQALAVAAMCLQEEAETRPLISDVVTAIEFLARKKVEVDEDELHSIKETSPENGDSSENSESDVDEEEKENTKKKEEKNGDDINNKE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0141 411 MobiDBLite consensus disorder prediction 363 411 - -
Apr2g0141 411 Gene3D Transferase(Phosphotransferase) domain 1 155 377 - -
Apr2g0141 411 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Apr2g0141 411 Gene3D Phosphorylase Kinase; domain 1 62 154 - -
Apr2g0141 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Apr2g0141 411 Coils Coil 381 401 - -
Apr2g0141 411 PANTHER RECEPTOR SERINE/THREONINE KINASE 1 380 - -
Apr2g0141 411 MobiDBLite consensus disorder prediction 390 411 - -
Apr2g0141 411 CDD STKc_IRAK 84 353 - -
Apr2g0141 411 SUPERFAMILY Protein kinase-like (PK-like) 64 369 IPR011009 -
Apr2g0141 411 Pfam Protein kinase domain 80 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0141 411 PANTHER OS07G0668900 PROTEIN 1 380 - -
Apr2g0141 411 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0141 Apr-Chr2 2036757 2039863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0141 1 390 Glycoside Hydrolase AT3G07070 59.250 1.98e-163 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Apr2g0141 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0141 - - gmx:100790474 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0141 2 2036757 2039863 Apr9g1719 9 26347474 26349981 ECH
Apr2g0141 2 2036757 2039863 Apr2g0141 2 2036757 2039863 ECH
Apr2g0141 2 2036757 2039863 Apr9g1719 9 26347474 26349981 PCT