Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0115 ATGGCGACCATTAAAGCTTCTTACACTATCATTCCAAATGAACCAACTCCCAATGGTCGATTATGGCTATCTGACTATGACCACTACACAAGACCGGGCCACACACCCCTTATTTACATTTACAGAGCAAAACACATCCACAAAAATGCCATTGAGAGGATGAGAAGCTCTCTAAGCAAGATTTTAGTGCACTATTACCCAATAGCTGGTAGATTGAGCTTGACACAAAGTGGTAGAATTGAATTGGATTGTAATACAAAGGGAGTGACATTGCTTGAAGCTGAATCCACAAAATCATTTGATGAATATGGAGACTTTTCACCCTCTATGCCCATCAAGGAACTTGTTCCAACAATTGACTATACTCAACCTATAGAGAGCCTTCCCTTGCTATTTATTCAAGTCACAAGGTTCCAAGGTGACCAAGGCCTTGCCATAGGATTAGCTGTGTCACATCCTGTGGGTGATGGGATTACTTGGATTCACTTTTTGAACTCATGGGCAAAGGTTGCTAAAGGAGACACGTTAGAGCCACATGAAATGCCATTTCTAGATAGAAAAATACTCAAATTCCCACACCAAACATCACCACCACACTTTGATCACCCAGAGTTGAAGACTTTGCCACTCCTGCTAGGCAAATATGATAGCATTGATGAGCAAAAAAAGAAGACAAGTTCTATATTGTTAAAACTCACATCAAATCAAGTGGAGATTTTGAAGAAGATGGCCAATGATGGATCCATGAAAGAAGGGTCAAGACCTTATAGTAGATATGAAGCTATTGTTGCACATATATGGAGATGTGCATCTAAGGCTCGTGAACTTGATGAGAATCAACCAACTATAGTGCGGTTCAATGTTAATTTTCGTAATATAATAAATCCACCTCTCCCTAGGAATTATTTTGGGAATGTTTTGGCACCAACAGTGACACCAACATGTTATGTTGGAGATATCATATCCAACCCTTTGAGTTATGCTGCCCAAAAAATAAGGGAAGCAACTGAATTGCTTACAAATGAGTACATAAGGTCACAAATGAGTGTTATTGTAGGTGAAGAGAAATTGGATTGCATAAAGGCTTTGTTTTTGGGACAAGGAGAACATGGGAATGCCCCATTTGGAGGGAATCCTAATCTTCACATCACAAGCTGGATGAGCATGGAAATGTATGAAGCAGATTTTGGGTGGGGAAAACCTGTGTATTTTGGTCTAGGATATTTGTTTCCACAAGATAGGGGAATTGTTATTCTTAGCCCAGAAGAGAGAGGATCTATTATTGTGAATATGCACTTTCAGATAGCTCATATACCACTATTTAAGAGATTCTTCTATGAGGATATATTCACGTCAAGGTTATAA 1365 0.3919 MATIKASYTIIPNEPTPNGRLWLSDYDHYTRPGHTPLIYIYRAKHIHKNAIERMRSSLSKILVHYYPIAGRLSLTQSGRIELDCNTKGVTLLEAESTKSFDEYGDFSPSMPIKELVPTIDYTQPIESLPLLFIQVTRFQGDQGLAIGLAVSHPVGDGITWIHFLNSWAKVAKGDTLEPHEMPFLDRKILKFPHQTSPPHFDHPELKTLPLLLGKYDSIDEQKKKTSSILLKLTSNQVEILKKMANDGSMKEGSRPYSRYEAIVAHIWRCASKARELDENQPTIVRFNVNFRNIINPPLPRNYFGNVLAPTVTPTCYVGDIISNPLSYAAQKIREATELLTNEYIRSQMSVIVGEEKLDCIKALFLGQGEHGNAPFGGNPNLHITSWMSMEMYEADFGWGKPVYFGLGYLFPQDRGIVILSPEERGSIIVNMHFQIAHIPLFKRFFYEDIFTSRL* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0115 454 Gene3D - 2 207 IPR023213 -
Apr2g0115 454 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 449 - -
Apr2g0115 454 Pfam Transferase family 3 446 - -
Apr2g0115 454 Gene3D - 214 448 IPR023213 -
Apr2g0115 454 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0115 Apr-Chr2 1708457 1721451 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0115 4 447 Monolignol Biosynthesis Gene Families AT5G48930 35.045 1.97e-85 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0115 K13065 - gmx:100789491 641.343