Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0113 ATGATCAATAATTCGCAAATCCAAGGTAAGTACAAGGTTCCTGTAGTCACAGAGCAAAGCTGTGAAATGGTGACCATCAAGGCATCTTACAGGGTGATTCCAAATGAGCCAACTCCCAATGGTCCTTTGTGGCTTTCTGAAAGTGACCAAATGGTGCGTTGGACTCATGCTGCTACACTCTACATTTACAAGGCAAACCACAAAGATGATGCCATTGAGAGAATGAGAGACTCTCTTAGCATGATTTTGGTGCATTACTATCCAATAGCTGGTCGATTAAGGTGGATACAAGGTGGTCGATTGGAGTTGGATTGTAATGCAAAAGGGGTGGTGTTGATGGAATCTGAATCCACAAAAAGAATGGCTGAATATGGAGACTTTTCACCCAAAGAACCCATCGAGGACCTTATTCCTACATTTGATTATACTCAACCAATAGAAGAGATTCCCTTGCTGGTTGTACAAGTCACAAGGCTCTATGATAAAGGTGTTGCTATTGGAGTTGCTCTTTCACATTCTCTGGCTGATGGGTTTGCTAATGTTTGTTTCATCAACACATGGGCCAAGTTGGTTCGTGGAGATACATTAGACATGGATGAAATGTTTCCAACTTTAGATAGATCAATAATGCTCAAATCCTCATACCCTTCATTTGCACCACGTTTTGATCATCCAGAGATGTACCCTCTTCCCCTCATGCTAGGAAAATCTGATTGCATGGAAGAGAAAAATAAGAGCCTCACGGTTGCAACATTGAAACTCACATCACAACAAGTGGAGAAACTGAAGAAGATGGCCAATGATCAAACTCAGAGAAAAGGGTCTAGACCTTATAGTAAATATGAAGCTATTGTTGCATATATATGGAGATGTGCATGTAAGGCTCGTCAACTTGATGACACTCAACCAACTCAAGTTCGGTTTCTTGTTGATATTCGCAACAAATTAAATCCACCTCTCCCTCAAAACTATTTTGGCAATGCTGTGGCAAGAACAGTGTCACCAATGTGCAATGTTGGAGAACTTATATCAAGCCCTTTGAGCTATGCTAGCCAGAAAATAAGGGAATCAATTGAAATACTAACAAATGAGTACATAAGGTCGCAGCAAGATTTTATTAGGGGGCAGGAACACTTGGATTGGATAAGGGCTTCTTATATACGTCCTAAAGAAGATAGGAATGCCCCATTTGATGGGAATCCTAATCTTGGGGTTGTGAGTTGGATGAGCATGCCATGGCAAAAAGCAGATTTTGGATGGGGGAAACCTATGCATTTCGGCCCTGGACACATGTGGCCTAGTGACATTGGAGTCATTATTGGAGGCCCAAATGGGGATGGTTCTATCATCATATCTATGCATTTTCAAGTAGCACATATGCAACTTTTCACCAAGTTCTTTTGGCAGGATATGTTAGATTCTAGCCTTTGA 1431 0.413 MINNSQIQGKYKVPVVTEQSCEMVTIKASYRVIPNEPTPNGPLWLSESDQMVRWTHAATLYIYKANHKDDAIERMRDSLSMILVHYYPIAGRLRWIQGGRLELDCNAKGVVLMESESTKRMAEYGDFSPKEPIEDLIPTFDYTQPIEEIPLLVVQVTRLYDKGVAIGVALSHSLADGFANVCFINTWAKLVRGDTLDMDEMFPTLDRSIMLKSSYPSFAPRFDHPEMYPLPLMLGKSDCMEEKNKSLTVATLKLTSQQVEKLKKMANDQTQRKGSRPYSKYEAIVAYIWRCACKARQLDDTQPTQVRFLVDIRNKLNPPLPQNYFGNAVARTVSPMCNVGELISSPLSYASQKIRESIEILTNEYIRSQQDFIRGQEHLDWIRASYIRPKEDRNAPFDGNPNLGVVSWMSMPWQKADFGWGKPMHFGPGHMWPSDIGVIIGGPNGDGSIIISMHFQVAHMQLFTKFFWQDMLDSSL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0113 476 Coils Coil 252 272 - -
Apr2g0113 476 Gene3D - 236 469 IPR023213 -
Apr2g0113 476 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 26 471 - -
Apr2g0113 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 471 - -
Apr2g0113 476 Pfam Transferase family 23 465 - -
Apr2g0113 476 Gene3D - 23 229 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0113 Apr-Chr2 1689507 1691959 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0113 24 469 Monolignol Biosynthesis Gene Families AT5G48930 33.929 7.02e-87 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0113 K13065 - gmx:100787038 557.755