Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0082 ATGTCAAAAAACAGTTCTCTGAATGTGGAATTATCGAAGAAGACGTCGTTTCTGGGATTGAGATTATGGGTTTTGATTGGGATAGGCGTTGGTGCTTTTATAGTTCTGATTCTTTGTATATTGTCTATATGGGTGATGTTTCGGAGAAAGTCTAGGAGTTCTCTGGACAAGTACTCTTTATCCCAAATACCACATGTGTCAAAGGATATAAAAGTTGACAAGGTTGGGGTGCAGACTCCTCAAGATCAAGCAGAAAGTGTATCTATTCCTGTTCATGACAAGGCAAGTGAGAACAATTCAGATAAGTTGTTAGTTCATTTGCGCATGAGCAAATCCAGTGATGCCGATAATATCAGCCAGTGCAGCTCAATGTATCATCATGAGAGAGGATTTAGTTCAATGTCAGGGGAAGAAGGAAGCTCTGGTACTGTAAAGAAACAGTCTACATTGGCATTTGGAGGGATGGTAACTGCCTCTCCTCTAATTGGTTTGCCAGAAATTTCTCATCTTGGATGGGGCCACTGGTTCACACTTAGAGATCTGGAACTTGCAACTAATCGCTTCTCTGCAGAGAATGTGATTGGTGAGGGTGGATATGGGGTTGTTTACTGTGGAAGATTGATCAATGGATCCGAGGTGGCAGTGAAGAAACTTCTTAATAACTTTGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTAGAGGCTATTGGTCATGTTCGACACAAAAATCTTGTGCGCTTACTTGGATATTGCATAGAAGGAGTTCACAGGTTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGGGCTATGAGCCAACAAGAGACACTTACCTGGGAAGCTCGGATGAAAGTTATACTTGGCACAGCCAAAGCGCTTGCTTACCTACATGAAGCAATAGAACCAAAAGTGGTTCACCGGGATATAAAGTCTAGCAACATATTGATTGATAATGAATTCAATGCAAAGGTTTCCGACTTTGGCTTGGCCAAACTTTTGGATTCAGGAGAAAGTCACATTACTACTAGGGTAATGGGAACATTTGGTTATGTGGCACCAGAATATGCTAATACAGGTTTGTTAAACGAGAGGAGTGACATTTACAGCTTTGGTGTTCTCCTGCTAGAAGCGGTTACAGGAAGGGATCCTGTAGACTATTCACGTCCTGCTAATGAGGTGAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAGGAGGGCTGAGGAAGTTGTGGACTCGAGGCTTGAAGTGAAACCATCAACACGTGCTTTAAAGCGTGCTCTTCTGGTTTCACTCAGGTGTGTTGACCCTGATGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATGCATTCCGAGAGGATCGAAGGAATAGAAAGAGTCGCACTGCTAGCATGGAAATTGAATCTCTGAAGGATGTTTCTGGTCCATCTGATGCTGAAAAAGTGAAGGGTGCTGAAGGCAATGCTCCAGAAACAACTCAAGGGTAG 1533 0.4273 MSKNSSLNVELSKKTSFLGLRLWVLIGIGVGAFIVLILCILSIWVMFRRKSRSSLDKYSLSQIPHVSKDIKVDKVGVQTPQDQAESVSIPVHDKASENNSDKLLVHLRMSKSSDADNISQCSSMYHHERGFSSMSGEEGSSGTVKKQSTLAFGGMVTASPLIGLPEISHLGWGHWFTLRDLELATNRFSAENVIGEGGYGVVYCGRLINGSEVAVKKLLNNFGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGAMSQQETLTWEARMKVILGTAKALAYLHEAIEPKVVHRDIKSSNILIDNEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNERSDIYSFGVLLLEAVTGRDPVDYSRPANEVNLVEWLKMMVGTRRAEEVVDSRLEVKPSTRALKRALLVSLRCVDPDAEKRPKMSQVVRMLEADEYAFREDRRNRKSRTASMEIESLKDVSGPSDAEKVKGAEGNAPETTQG* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0082 510 ProSitePatterns Protein kinases ATP-binding region signature. 194 217 IPR017441 GO:0005524
Apr2g0082 510 Gene3D Phosphorylase Kinase; domain 1 170 263 - -
Apr2g0082 510 MobiDBLite consensus disorder prediction 469 510 - -
Apr2g0082 510 SUPERFAMILY Protein kinase-like (PK-like) 172 460 IPR011009 -
Apr2g0082 510 SMART serkin_6 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0082 510 Gene3D Transferase(Phosphotransferase) domain 1 264 478 - -
Apr2g0082 510 PANTHER OS01G0323000 PROTEIN 2 507 - -
Apr2g0082 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Apr2g0082 510 ProSiteProfiles Protein kinase domain profile. 188 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0082 510 Pfam Protein kinase domain 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr2g0082 510 CDD STKc_IRAK 194 460 - -
Apr2g0082 510 PANTHER RECEPTOR-LIKE KINASE PLANT 2 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0082 Apr-Chr2 1275557 1280131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr2g0082 5 462 Trihelix Transcription Factor Family AT1G70460 39.140 5.92e-96 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Apr2g0082 Pkinase 9.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0082 - - gmx:100813931 924.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0082 2 1275557 1280131 Apr2g0082 2 1275557 1280131 ECH
Apr2g0082 2 1275557 1280131 Apr9g1682 9 26071684 26076825 PCT
Apr9g1088 9 20318633 20322271 Apr2g0082 2 1275557 1280131 PCT