Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr2g0068 ATGGGTTGCTTCTTCGCTTGCTTCAGAGCTCGCGACTCCACCACCGCTACAGTACCTTCTTCTTGTCCCAACAATCCCAAAGATGTTGAGGTCTCTCGAAATCGTTTATCAACTTTGTTTCTATCTGAAGAGAGAGAAGAAGCTGTGCGTGAGGATGGTAAGAATTTTGAAGTGGGATCTCAGAAAGATGACAAGGGTTTTAAAGATGAGGCAAAGGTTCTCAAACCTTTGAGTACCGTGTCAAAGACCCCTGCCGAGAAAGTTCAGCTCAATTGTGAACCTTTCAATCCCCCAACTCCCATAAAACATTGCGAAGAATGGGGGAAAAGAACTGATTCTTTAGAGCACACTCCAAGCAGCTGTATCTCCAATGCAAATAGCACTCAATGTGATTCTCTTGATTCTACGGAAGGGATTAGGACTGGGAATCTTCATGCTTTGGATAGGAATGACAAGAATACAGCTTCTGTTTCACCTTGGCCATCAACCACATACACTAAGAGGAGGAACAAGTCTGTACGTTTTGAATGTGACACTGATTTATCATCCTGTGACTCGTCTGATTATGGTGGATGGAATATGAAGAAAACAGAGTCACCAAATAATGAGAATGCATATAAACCATCACCTTATCCTACCCCAATGAAGCTATCTGATGAGATGCAGACTCCTGGAACTGTTTACCCTGCAACAAGAGAAGACTTACTAAATGGTAAGCCTCGAGTTAAGTCTCAATTTGTGTATCCAATTTATAGCCCTGGTGATGCTGTCTCTCAGAACAAGATACTGGAGGAAGAGGATCATATCTCTGAACAAGATTCAAGGAAGCTGAGTGAATCAGTGGAGCGGTCTCAAGTTACAACTTCTACACCTGAAAAAGCGTTAAAGAAAATGTCTTATGATAGTGAATCTAAGGTGGAAGAAAGCTTATCTTCTTGGTTAAAGCCTGCTGCTGTCATTCTGGAGGAAAGAAACAAGAGATTGGAGATTGCTTATAATCAGATCCGCAAAACTCCTGCTGAGAGGCCTATCATTGGGATGGTTGCAGCACATTGGAATGAGGATGAGGATTCTCAAGTTCCTCCTCCTAAGTGGTGGGATGGCAATGGCATACCAAATTCAACCAATAAGTATAAAGAAGATCAAAAAGTGAACTGGCATGCAACGCCATTTGAAGAGAGGTTGGAGAAGGCATTATCTGAGGAAACCTTCATCACTCAAAGGAAGGATGCATGTGGACAACCAATTCCTTTTGATGAGAATGAAGAAAGTGATACTGCACTATCTCAGCTGCAATCTTCAAATCATCCACAGTCTGTGGTCTCATTCTGA 1332 0.4227 MGCFFACFRARDSTTATVPSSCPNNPKDVEVSRNRLSTLFLSEEREEAVREDGKNFEVGSQKDDKGFKDEAKVLKPLSTVSKTPAEKVQLNCEPFNPPTPIKHCEEWGKRTDSLEHTPSSCISNANSTQCDSLDSTEGIRTGNLHALDRNDKNTASVSPWPSTTYTKRRNKSVRFECDTDLSSCDSSDYGGWNMKKTESPNNENAYKPSPYPTPMKLSDEMQTPGTVYPATREDLLNGKPRVKSQFVYPIYSPGDAVSQNKILEEEDHISEQDSRKLSESVERSQVTTSTPEKALKKMSYDSESKVEESLSSWLKPAAVILEERNKRLEIAYNQIRKTPAERPIIGMVAAHWNEDEDSQVPPPKWWDGNGIPNSTNKYKEDQKVNWHATPFEERLEKALSEETFITQRKDACGQPIPFDENEESDTALSQLQSSNHPQSVVSF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr2g0068 443 MobiDBLite consensus disorder prediction 410 443 - -
Apr2g0068 443 MobiDBLite consensus disorder prediction 423 443 - -
Apr2g0068 443 MobiDBLite consensus disorder prediction 267 300 - -
Apr2g0068 443 PANTHER - 83 430 - -
Apr2g0068 443 PANTHER - 1 86 - -
Apr2g0068 443 MobiDBLite consensus disorder prediction 354 377 - -
Apr2g0068 443 MobiDBLite consensus disorder prediction 281 295 - -
Apr2g0068 443 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 83 430 IPR039300 GO:0007142
Apr2g0068 443 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 1 86 IPR039300 GO:0007142
Apr2g0068 443 Coils Coil 318 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr2g0068 Apr-Chr2 1051272 1056363 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr2g0068 - - gmx:100527635 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0068 2 1051272 1056363 Apr2g0068 2 1051272 1056363 ECH
Apr2g0068 2 1051272 1056363 Apr9g1654 9 25864606 25868279 PCT
Apr9g1665 9 25960706 25963722 Apr2g0068 2 1051272 1056363 PCT